Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 301 a.a., putative ribosomal large subunit pseudouridine synthase from Pseudomonas putida KT2440

 Score =  260 bits (664), Expect = 3e-74
 Identities = 140/278 (50%), Positives = 182/278 (65%), Gaps = 2/278 (0%)

Query: 20  SCVGLPYGPWPTIAEFLIERFPAITREAWLERIAANDVIDEHHVPVTAERRYQSPLRVYY 79
           S V LP G W T+ + L + F AI R  WL+R A   V+D     V A+  Y+  +R++Y
Sbjct: 20  STVCLPPGNWVTVLDCLCDHFKAIDRAQWLDRFARGRVLDAKGQAVAADLPYKRGMRLHY 79

Query: 80  YRSLDNEVHIPFEEQVVFRDDQLLVVDKPPFLPVTPTGKYLQQSLLVRLKRKLELDDLVP 139
           +R + NE  IP +E V+  D+ L+V DKP FLPVTPTG+Y++Q+LL RL R+L+   LVP
Sbjct: 80  FREVPNERPIPVQEVVLHVDEHLVVADKPHFLPVTPTGEYVEQTLLRRLIRRLDNPHLVP 139

Query: 140 LHRIDRSTSGLVLFSVRPETRGAYQAMFPERRIDKHYEAVVPWQDGVSSVPATYRSRLVD 199
           LHRIDR T+GLVLFS  P +R AYQ +FPERRIDK Y+A+        + P  ++SRLV 
Sbjct: 140 LHRIDRHTAGLVLFSANPHSRSAYQRLFPERRIDKRYQAIAAAMP-QHAFPLVHKSRLVH 198

Query: 200 DEHFMRVREEPGEPNSETHIELLAAQGGHALLKLSPVTGRKHQLRVHCQALGMPIVNDPI 259
            E F R+ E  GE NSET  E+L   G      LSPVTG+ HQLRVH  ALG  I NDP 
Sbjct: 199 GEPFFRMHEVEGEANSETLAEVLEKNGERWRYGLSPVTGKTHQLRVHMAALGAGISNDPF 258

Query: 260 YPVLLPENTDDFDKPLQLLAKSVAFIDPITGEQRRFTS 297
           YP LL E  DD+ +PL+LLA+S+ F DP++G++R F S
Sbjct: 259 YPQLLNEE-DDYQRPLKLLAQSLRFEDPLSGKERYFES 295