Pairwise Alignments

Query, 306 a.a., Pseudouridine synthase (EC 4.2.1.70), PA2043 type from Variovorax sp. SCN45

Subject, 319 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Escherichia coli ECRC62

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 70/218 (32%), Positives = 105/218 (48%), Gaps = 23/218 (10%)

Query: 95  VVFRDDQLLVVDKPPFLPVTPTGKYLQQSLLVRLKR-KLELDDLVPLHRIDRSTSGLVLF 153
           +++ DD +LV++KP    V   G  L   ++  L+  + E   L  +HR+DR TSG++L 
Sbjct: 95  ILYEDDHILVLNKPSGTAVHG-GSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLV 153

Query: 154 SVRPETRGAYQAMFPERRIDKHYEAVV--PWQDGVSSVPATYRSRLVDD-EHFMRVREEP 210
           + +     +      E+ + K Y A+V   WQ  V SV A     ++   E  +RV +E 
Sbjct: 154 AKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQE- 212

Query: 211 GEPNSETHIELLAAQGGHALLKLSPVTGRKHQLRVHCQALGMPIVNDPIYPVLLPENTDD 270
           G+P SET  ++        L++ SPVTGR HQ+RVH Q  G PI  D  Y         +
Sbjct: 213 GKP-SETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRY------GDRE 265

Query: 271 FDKPLQ----------LLAKSVAFIDPITGEQRRFTSP 298
           FD+ L           L A ++ F  P TGE  R  +P
Sbjct: 266 FDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAP 303