Pairwise Alignments

Query, 327 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 342 a.a., ABC transporter, periplasmic binding component-related protein from Pseudomonas putida KT2440

 Score =  317 bits (813), Expect = 2e-91
 Identities = 165/321 (51%), Positives = 217/321 (67%), Gaps = 3/321 (0%)

Query: 8   LAGAAAIAFLATAP-AQAEDKFTYMTNWYAQAEHGGFYQAVAQGIYKKYGLDVTIKMGGP 66
           LA A     L  AP A A DK   +T+WYAQAE GGFYQA+A G+Y+K GLDV+I+MGGP
Sbjct: 16  LAAALLPTTLTIAPLAIAGDKVVLLTSWYAQAEQGGFYQALADGLYEKEGLDVSIRMGGP 75

Query: 67  QVNITQMMAAGQADCIMGSSDIQMMQVREGGVPVVNVAAFFQKDPQVLIAHDDVKKFEDL 126
           QVN  Q++ + QAD I+ + D+Q+++  E G+PVV VAA FQ DPQ L+ H DV   + L
Sbjct: 76  QVNGMQLLVSKQADFIV-NYDLQILKSVEQGLPVVAVAAPFQGDPQGLMTHADVSGLDAL 134

Query: 127 KGKTLLIGAQAQRGYWPWLKAKFGFTDEQTRPYTFNIQPFVADKNTAQQGYLTSEPFAIQ 186
            GK +L+    Q+ +WPWLK K+   D Q RPYTFN+QPF+AD  T QQ Y +SE F   
Sbjct: 135 GGKPVLVSTSGQQTWWPWLKGKYQLADNQARPYTFNLQPFLADPQTTQQAYASSELFQAI 194

Query: 187 KAGVKSTVLMFSDHGFPAYATTVSCMEKTLKDRNKQVAAFVKASAEGWKSYLADPAPANA 246
           KAGV     +F+D G+P Y +TV   +  + +  ++VA FV+AS EGWK YL DP+  NA
Sbjct: 195 KAGVTPNFFLFADAGYPPYGSTVVTRQDIIAEHPERVAGFVRASMEGWKRYLDDPSAGNA 254

Query: 247 LIKKDNPNMTDEQLAYSVAKLKEMGMITGGDAAKLGIGVMTDARAKASYDFLVASKLLDP 306
           LIK+DNPNMTDE LA+ V+ LK+  ++TGG+AA  GIG MTD+R +A+ DF+V + LL P
Sbjct: 255 LIKRDNPNMTDELLAWGVSTLKQYRLVTGGEAATQGIGTMTDSRWQATRDFMVEAGLLGP 314

Query: 307 AKVELAKTYSTEFVKDAKVLP 327
                   Y+T FV+D KVLP
Sbjct: 315 -DAPWRNAYTTRFVQDLKVLP 334