Pairwise Alignments

Query, 268 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 283 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 73.9 bits (180), Expect = 3e-18
 Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 12/231 (5%)

Query: 21  LIGVVLVALWQWMV-----VAMELPAYLVPSPYLMMQTLVTDWAPLGNALLVTLKITVLS 75
           L G++  A W  M+     VA      +V +  ++    +     L + L+ TL + +++
Sbjct: 43  LEGLLRAAPWWLMLAIVGGVAWHATRKVVTTAVIVGLLFLVGAVGLWDKLMQTLALMMVA 102

Query: 76  FLLATVAGVLISFLFVQSKRIETALFPYAVLLQVTP-IVAVAPLIIIWVKNPVAAMTVCA 134
            +++ + GV +  L  +S R+ + L P   ++Q  P  V + P+++++    V A+    
Sbjct: 103 TVISVLIGVPLGILSARSNRLRSVLMPLLDIMQTMPSFVYLIPVLMLFGLGKVPAI-FAT 161

Query: 135 ALVALFPIISNTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPSALPYFFGGLRISSGL 194
            + A  P+I  T LG+R +D ++        A RWQQL  +++P ALP    G+  ++ +
Sbjct: 162 VIYAAPPLIRLTDLGIRQVDGEVMEAINAFGANRWQQLFGVQLPLALPSIMAGINQTTMM 221

Query: 195 ALIGAVVAEFVAGTGGSGAGLAYQILQAGFQLNIPRMFAALLLISLTGVAL 245
           AL   V+A  +        GL   +L     LN+ R   A L I +  V +
Sbjct: 222 ALSMVVIASMI-----GARGLGEDVLVGIQTLNVGRGLEAGLAIVILAVVI 267