Pairwise Alignments

Query, 268 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 267 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  332 bits (850), Expect = 7e-96
 Identities = 168/264 (63%), Positives = 210/264 (79%)

Query: 2   KKNIPLMSQPRVQRVLYPVLIGVVLVALWQWMVVAMELPAYLVPSPYLMMQTLVTDWAPL 61
           + + P +  P V R++ P+L+G +L+ +WQ   +A ++P YLVPSP  + +TLV D   L
Sbjct: 3   RPSTPWLRHPSVLRIVSPLLVGALLLGVWQLACIAWKVPVYLVPSPADIGRTLVADGPML 62

Query: 62  GNALLVTLKITVLSFLLATVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIII 121
             AL +TLKIT LSF LA V G L +F+FVQS+ +E +LFPYA+LLQVTP+VA+APLIII
Sbjct: 63  LGALWMTLKITFLSFALAVVIGTLAAFVFVQSRVVEASLFPYAILLQVTPVVAIAPLIII 122

Query: 122 WVKNPVAAMTVCAALVALFPIISNTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPSAL 181
           W  +   A+ +CA LVA+FPII+NT LGLRS++P L + F LNRA+RWQ L+RLRIPSAL
Sbjct: 123 WCSDTTLALVICATLVAIFPIIANTVLGLRSVNPGLLNLFHLNRASRWQVLLRLRIPSAL 182

Query: 182 PYFFGGLRISSGLALIGAVVAEFVAGTGGSGAGLAYQILQAGFQLNIPRMFAALLLISLT 241
           P FF GLRI+SGLALIGAVVAEFVAGTGG+GAGLAYQILQAGFQLNIPR+FAAL+LI+LT
Sbjct: 183 PCFFAGLRIASGLALIGAVVAEFVAGTGGTGAGLAYQILQAGFQLNIPRLFAALVLIALT 242

Query: 242 GVALFVLMAWLTKVALGSWHASEL 265
           GVALF LMA L +++L  WH SEL
Sbjct: 243 GVALFSLMALLARLSLRHWHESEL 266