Pairwise Alignments

Query, 268 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score = 76.6 bits (187), Expect = 5e-19
 Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 7/247 (2%)

Query: 17  LYPVLIGVVLVALWQWMVVAMELPAYLVPSPYLMMQTLV--TDWAPLGNALLVTLKITVL 74
           L P  + V+L+A+WQ  V A  L   ++P+P  ++   V       +   L ++     L
Sbjct: 13  LAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISGWRAGL 72

Query: 75  SFLLATVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIWVKNPVAAMTVCA 134
            F++    G+++ F+   S   E  L     +++  P +A+ PL+I+W     +A     
Sbjct: 73  GFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIFLV 132

Query: 135 ALVALFPIISNTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPSALPYFFGGLRISSGL 194
           AL  LFPI  NT  G+R++DP L    +    + +    ++ +P ALP    G+R + G 
Sbjct: 133 ALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFALGF 192

Query: 195 ALIGAVVAEFVAGTGGSGAGLAYQILQAGFQLNIPRMFAALLLISLTGVALFVLMAWLTK 254
             +  +VAE ++    + AG+ Y  + A   L    +  A++L ++ G    +    L +
Sbjct: 193 MWLTLIVAETIS----ANAGIGYLAMNAREFLQTDVVVLAIVLYAVLGKIADLAARGLER 248

Query: 255 VALGSWH 261
           V L  WH
Sbjct: 249 VWL-RWH 254