Pairwise Alignments

Query, 268 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 12/247 (4%)

Query: 18  YPVLIGVVLVALWQWMVVA-MELPAYLVPSPYLMMQTLVTD--WAPLGNALLV-----TL 69
           +PV +  +L  L  W V A +++   L+   Y+     V D  W  L ++ L+     +L
Sbjct: 8   WPVRLASLLACLLFWQVAANVKMDLGLLTFTYVPTPKAVLDAAWQLLTSSTLLAHLGSSL 67

Query: 70  KITVLSFLLATVAGVLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIWVKNPVAA 129
                 +  A + GV +  L  +SK  E  L P   +L+  P VA  PL I+   +   +
Sbjct: 68  ARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPLEVLRPIPAVAWIPLAILMFPSSELS 127

Query: 130 MTVCAALVALFPIISNTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPSALPYFFGGLR 189
           M       ALFPI+ NT  G+ ++DP L +  +   A RW  L  + +P ALP    GL 
Sbjct: 128 MVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLPGALPSIVTGLA 187

Query: 190 ISSGLALIGAVVAEFVAGTGGSGAGLAYQILQAGFQLNIPRMFAALLLISLTGVALFVLM 249
           I  G +    V AE ++G  G G    Y   ++    N P +   +LLI + G+    L+
Sbjct: 188 IGMGTSWFCLVTAEMISGQFGIG----YYTWESYTLQNYPDIVVGMLLIGVLGMGSSALV 243

Query: 250 AWLTKVA 256
             L  +A
Sbjct: 244 KRLGALA 250