Pairwise Alignments

Query, 268 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 278 a.a., ABC transporter permease from Erwinia tracheiphila SCR3

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 9/222 (4%)

Query: 25  VLVALWQWMVVAMELPAYLVPSPYLMMQTLVTDWAPLGNALLVTLKITVLSFLLATVAGV 84
           V++ LWQW     E    +V   +++        A +   L++TL  T+L+F++ T  G+
Sbjct: 47  VVIILWQWFTEG-EGGLDIVWGDHVLWSLHFP--AQIYPHLIITLAETLLAFIIGTAMGM 103

Query: 85  LISFLFVQSKRIETALF-PYAVLLQVTPIVAVAPLIIIWVKNPVAAMTVCAALVALFPII 143
            +  LF+    + +A+F PY   L   P V +AP+  +W    + +    A  +  F + 
Sbjct: 104 TVG-LFLGINPLLSAIFSPYIKALNSLPRVILAPIFAMWFGLGIWSKVAFAITLVFFVVF 162

Query: 144 SNTTLGLRSIDPDLQSYFKLNRATRWQQLVRLRIPSALPYFFGGLRISSGLALIGAVVAE 203
            N   G+R ++  L    ++  A + QQL+ + +PSA  + F  L +S GLA +G+VV E
Sbjct: 163 FNVWQGVRDVNSVLLDNIRMLGANKRQQLMTIYLPSATSWVFSSLHMSIGLAFVGSVVGE 222

Query: 204 FVAGTGGSGAGLAYQILQAGFQLNIPRMFAALLLISLTGVAL 245
           ++    GS  G+ Y ILQA    +I  + A  LL++L  + L
Sbjct: 223 YL----GSYRGIGYLILQAEGSFDINTILAGTLLLTLFALLL 260