Pairwise Alignments

Query, 268 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 268 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Acinetobacter radioresistens SK82

 Score = 86.3 bits (212), Expect = 6e-22
 Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 19/253 (7%)

Query: 17  LYPVLIGVVLVALWQWMVVAMELPAYLVPSPYLMMQTLVTDWAPL-GNALLVTLKITVLS 75
           L P L+ ++L+ LWQ   ++  L + ++P+P  ++      W+ L    L   +K++   
Sbjct: 22  LLPWLVPLLLLVLWQLTSMSGLLQSRILPAPTAVLTAF---WSLLISGELWQHVKVSTAR 78

Query: 76  FLLATVAG----VLISFLFVQSKRIETALFPYAVLLQVTPIVAVAPLIIIWVKNPVAAMT 131
            L     G    +L+  L   SK     L     +L+  P +A+ PL+I+W     +A  
Sbjct: 79  ALTGLAVGGGLGLLLGLLNGSSKVASNLLDTTLQMLRNIPALALIPLVILWFGIDESAKL 138

Query: 132 VCAALVALFPIISNTTLGLRSIDPDLQSYFK---LNRATRWQQLVRLRIPSALPYFFGGL 188
              A+   FPI  NT  G+RS+DP L    K   LNR   +QQ++   +P A+P    GL
Sbjct: 139 FLVAIGVFFPIYINTYHGIRSVDPQLIEMGKSYGLNRRQLYQQII---LPGAMPSILVGL 195

Query: 189 RISSGLALIGAVVAEFVAGTGGSGAGLAYQILQAGFQLNIPRMFAALLLISLTGVALFVL 248
           R + GL  +  +VAE ++   G G    Y  + A   L    +   +LL +L G    +L
Sbjct: 196 RFALGLVWVLLIVAETISAQSGIG----YMTMNAREFLQTDIVLVGILLYALLGKLADIL 251

Query: 249 MAWLTKVALGSWH 261
              L +  L  WH
Sbjct: 252 AQGLERYLL-RWH 263