Pairwise Alignments

Query, 326 a.a., Alkanesulfonates-binding protein from Variovorax sp. SCN45

Subject, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

 Score =  150 bits (379), Expect = 4e-41
 Identities = 105/310 (33%), Positives = 155/310 (50%), Gaps = 8/310 (2%)

Query: 12  SSRRQFLVQG--ASVAAAIAAAPALVSAQGRPVLKAGDQKGGLLALLEAAGGLEGL---- 65
           S  R+ L+ G  ASVA+A+      ++   R  L+ G QK   + +L+ +G LE      
Sbjct: 9   SPLRRLLIGGLLASVASALLPWSEAIADDAR-TLRIGYQKFNSINILKGSGALEKALAPQ 67

Query: 66  GYDIQWSEFPAAAPLAEALNAAAVDSGPIGDAPLIFALAAGTRVKAIGANRSDSYGTAVL 125
           G  + W EF A   L EAL+  A+D G   DAP +FA AAG  V  + A +    G  ++
Sbjct: 68  GVKVSWHEFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGLV 127

Query: 126 VRPDSPLKAAGDLRGKSVATNRGSIGHYVTLKAITAAGLKPEDVNIRFL-APADAKLALT 184
           VR    L +  DL+GK VAT RG    Y+   A+  AGL  +D+   ++   ADA  AL 
Sbjct: 128 VREQDHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAALQ 187

Query: 185 QGSVDAWATWEPYTALAEVSNHARVLVSGRGLLPGLSYLAATDSAIAAKRPVLQDFLQRV 244
            GSV A   W+P+ A AE     + L  G GL    ++  +T S     R +L+ F   +
Sbjct: 188 SGSVQAVTLWDPFLAAAESQPGLKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFFAEL 247

Query: 245 VKAQLWSYRNVDAYSAALARIIGIPPEAAKLQFERRQQKWVAIDAQVISDQQGTADFYRQ 304
            K   W+       +A LA  +GI  +  ++  ERR    VAI  Q++++QQ  AD ++ 
Sbjct: 248 GKVSQWANAKPAEVAALLAPQLGISTQVLEVASERRNYNAVAITPQIVAEQQKLADTFQG 307

Query: 305 VGLIKQPLDV 314
           +GLI + L V
Sbjct: 308 LGLIPRKLQV 317