Pairwise Alignments

Query, 414 a.a., Acyl-CoA dehydrogenase from Variovorax sp. SCN45

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 95/376 (25%), Positives = 159/376 (42%), Gaps = 26/376 (6%)

Query: 26  APALLAQLSARFAATAADHDHSGAFPRENFDALQAHGLIGLVAPAAYGGGGATLATARRV 85
           A A+ A    R    A   D    FP+E  D +   GL G++ P  +GG           
Sbjct: 11  ADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDTGYVAYAMA 70

Query: 86  IAAVARGEPATALILTMTYLQHHALTRGDS-RWPAHLRERVTRDAVERGALINALRV-EP 143
           +  +A G+ A + I+++    H+++      R+    ++      +  GA++ A  + EP
Sbjct: 71  LEEIAAGDGACSTIMSV----HNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFALTEP 126

Query: 144 ALGSPARGGLPATVARRDASGWKIDGHKLYTTGIEGLSWLAVWARTDEATPRTGV--FLV 201
             GS A      T AR +   + ++G K + T  +    + V+A TD    + G+  F+V
Sbjct: 127 QAGSDASS--LKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAFIV 184

Query: 202 PRHAPGVRVIASWDHLGLRASGSHEVVFENVAIGADHAVDLRAPADWAPDAGSQTDIDAH 261
           P  +PG +V    D LG  AS + ++VF+NV +   + +           A  +      
Sbjct: 185 PTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRIGI 244

Query: 262 ATQQAWMTVLLGSLYDAVAASARDWLVGFLNQRAPGSLGAPLASLPRVHEHVGEIEALLR 321
           A+Q   M         A    ARD    + N+R   S G PL     V   + ++   + 
Sbjct: 245 ASQAVGMA-------RAAFEVARD----YANERQ--SFGKPLIEHQAVAFRLADMATKIS 291

Query: 322 TNRVLLDDATAAVDGGHAQPA-IDSGLLKYTVTGNAVRAVELALQLSGNHGLTRQNPLER 380
             R ++  A A  D G  +PA +++ + K   +  A +    ALQ  G +G     PLER
Sbjct: 292 VARQMVLHAAALRDAG--RPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLER 349

Query: 381 HYRDVLCSRIHTPQND 396
            YRDV   +I+   +D
Sbjct: 350 IYRDVRVCQIYEGTSD 365