Pairwise Alignments

Query, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

Subject, 626 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

 Score =  343 bits (880), Expect = 1e-98
 Identities = 203/457 (44%), Positives = 273/457 (59%), Gaps = 24/457 (5%)

Query: 4   SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63
           SF++L L+E L RA+   GY   TP+Q++AIP VL G+D+M AAQTGTGKT  F+LP+L+
Sbjct: 2   SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61

Query: 64  RMLK--HENASTSPARHPVRALVLLPTRELADQVAQQIKLYAKYTNLRSTVVFGGIDMKP 121
           R+    H + S        R LVL PTRELA QV    K+YA+   L S  +FGG+ M P
Sbjct: 62  RLFPAGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKVYARDLPLVSACIFGGVGMNP 121

Query: 122 QTLELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181
           Q   + KGV+VLVA PGRLLD        L  VE +VLDEADRMLD+GF+ D++++L+ L
Sbjct: 122 QIQAIAKGVDVLVACPGRLLDLAGQGKVDLAHVEILVLDEADRMLDMGFIHDVKKVLARL 181

Query: 182 PKQRTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQHFYSVSDDDKRRALK 241
           P +R  LLFSATFS +I  LA   L NP  IEV  PN T   +EQ  Y +    KR  L 
Sbjct: 182 PAKRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALLA 241

Query: 242 QIVRQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEVD 301
            ++      Q  VF  +K G  RLA  LE+ GL   A+HG+KSQ+ R KALA FKA  V 
Sbjct: 242 HLITLGAWEQVLVFTRTKHGANRLAEYLEKQGLTAAAIHGNKSQNARTKALADFKANSVR 301

Query: 302 LLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDARL 361
           +LV TD+AARGLDI  +P V NF++P   EDYVHRIGRTGRAG SG A+S  +  ++ +L
Sbjct: 302 VLVATDIAARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAISLVA-PDEEKL 360

Query: 362 VADIEKLIKKKIE------LEPVEFEEDRPRGR---INDGR--RHWREEGEAG------- 403
           +  IE++ K++I        +  + E ++P  R    N+GR  R+ +  GE G       
Sbjct: 361 LKSIERVTKQRIADGDLMGFDASQVEAEKPEARERPQNNGRGGRNQQARGEGGKDTNGGR 420

Query: 404 -DARDVLDQPRERSSSLSGDARRGGGRPHRAPAAPRD 439
            D      + R+++++   D  + G +  + P  PRD
Sbjct: 421 KDKGKDKGKARQQAAAKPDDKEKSGDK--QQPRKPRD 455