Pairwise Alignments

Query, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

Subject, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

 Score =  330 bits (846), Expect = 6e-95
 Identities = 191/429 (44%), Positives = 267/429 (62%), Gaps = 22/429 (5%)

Query: 4   SFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPLLQ 63
           +F+ L L EPL R + ++ Y T TP+Q +AIP VL+G+D+M AAQTGTGKTA F+LP+LQ
Sbjct: 2   NFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVLQ 61

Query: 64  RM-LKHENASTSPARHPVRALVLLPTRELADQVAQQIKLYAKYTNLRSTVVFGGIDMKPQ 122
           R+ L+ E      A + +RALVL+PTRELA+QV   ++ YA+   L +  V+GG+ + PQ
Sbjct: 62  RLALEGEKV----ASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQ 117

Query: 123 TLELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSYLP 182
            + L++GV++LVATPGRLLD         NQV+ +VLDEADRMLD+GF  +LQ + + LP
Sbjct: 118 MMRLRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALP 177

Query: 183 KQRTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQHFYSVSDDDKRRALKQ 242
           ++R TLLFSATFS +I+ LA   L +P++IEV+  N TA++V+Q    V    K      
Sbjct: 178 RKRQTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKADLFCH 237

Query: 243 IVRQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEVDL 302
           ++R++   Q  VF  ++ G  +L   L  +G+    +HGD+ Q  R +AL SFKA EV +
Sbjct: 238 LLRKQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQV 297

Query: 303 LVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDARLV 362
           LV TDVAARGLDI D+P V N D+P  AEDYVHRIGRTGRAG  G A+S     ++ +L+
Sbjct: 298 LVATDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVC-ADEVQLL 356

Query: 363 ADIEKLIKKKI--ELEPVEFEEDRPRGRINDGRRHWREEGEAGDARDVLDQPRERSSSLS 420
           A IE L ++ +    EP    E R       G+              V+ +P++      
Sbjct: 357 AAIEVLTRQTLPRHEEPDFIPEHRVPMTDASGQ--------------VIKKPKKPKKPKE 402

Query: 421 GDARRGGGR 429
             A+RG GR
Sbjct: 403 NSAKRGLGR 411