Pairwise Alignments

Query, 315 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  313 bits (803), Expect = 3e-90
 Identities = 158/306 (51%), Positives = 220/306 (71%)

Query: 1   MKRIGVLVFPGFQILDLAAIAAFELANMHLDQPVYCVEMLSETGGPVVSSSGVTVDSKRY 60
           M  + ++V+P FQ L L+  + FE AN+   +P Y   ++SE+GG V++S G +V++   
Sbjct: 1   MHSVALMVYPNFQSLSLSLGSVFECANLLRGEPAYEFHLVSESGGAVMTSQGFSVNTTPI 60

Query: 61  TAAKFDTLVMTGSLTITPTSEKLCQILRSGRRSARRVASICTGAFGLADAGLLDGRRVTT 120
               +DTL+++G L        L +++++    +RRVAS+C G F LA+AGLL+G+R TT
Sbjct: 61  RPEGYDTLIVSGYLEFRLPEANLLELVKAASAQSRRVASLCMGIFVLAEAGLLEGKRTTT 120

Query: 121 HWAFAQELQRCHPLAKVQPDRIFINDDSLWTSAGMTAGIDLVLALVEEDLGVDMARLIAK 180
           HW  A   ++ +P  +++ D++FI D  +WT AGM+AG+DL LA+VE DLG D+AR IA+
Sbjct: 121 HWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLALAMVENDLGSDLARRIAR 180

Query: 181 KLVVYHRRAGGQSQFSALLELEPKSDRIQLALAYARAHLREGLSVEELAEVAHLSPRQFS 240
           KLV+  RR   QSQ SALLEL+PKSDR+QLALAYAR +L   LSVE LA+VA LSPRQFS
Sbjct: 181 KLVIAQRRGSEQSQLSALLELDPKSDRVQLALAYARENLTHDLSVEALADVARLSPRQFS 240

Query: 241 RAFKAETGQSPAQAVESLRVEAARALIDEGRLALGVVAQEVGFGDPERMRRAFLRTLGQP 300
           R F+ ETGQ+PA+A+ESLRVEAARA+++  R  + VVA+E GFGD ERMR+AFLR  GQP
Sbjct: 241 RVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETGFGDRERMRQAFLRAFGQP 300

Query: 301 PQSVRR 306
           PQ +++
Sbjct: 301 PQVMQQ 306