Pairwise Alignments

Query, 305 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  102 bits (255), Expect = 8e-27
 Identities = 85/298 (28%), Positives = 142/298 (47%), Gaps = 11/298 (3%)

Query: 11  MRPDLDSLALFLRAIEHGSLSKAAAESHMVLSAASRRLAILEGHLGVALLNRTSKGVTPT 70
           M  +L  +  F++  E GS  +AA   H+   A SRR+  LE  LG +LL RT++ V+ T
Sbjct: 1   MEYELQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLT 60

Query: 71  GAGESLAMHARQILRDVDRMRADLSDYAQGATGRVRLHANASAMGQFLPDDVASFRVRYP 130
             G      AR++L D +     + + A+  TG+V L    +A   FLP  +  +  +YP
Sbjct: 61  SVGRDFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYP 120

Query: 131 EIRVSVEEHRSVYIVQAIRDRQADVGVITSEAVDPALNFIPYRTDRLVAIVRQKHPWRGR 190
           +IR+ + +  +   ++A+   +AD G+       P + F+    +  V   R+ HP   R
Sbjct: 121 KIRIRLLDLSANDGLEAVLRGEADFGINMMSGQHPDIEFVSLVQEHFVLACRRDHPLANR 180

Query: 191 -EVSFEELLDFDFVGLEDDSAISRTMEDAAMSARKVLRLRVR----VKSFEAVCRMIEAG 245
             V++ EL D+  +G+   S  +R + D A+S    L LR +    V+       M+EAG
Sbjct: 181 ASVTWTELADYRLIGVGRLSG-NRMLLDHALSG---LNLRPKWFYEVQHLSTSLGMVEAG 236

Query: 246 MGVGILPEGAAVTYRKEMKLRFINLTDAWASRRMYLCTRQEA-LSFPQRRLVDHLLAR 302
           +GV  +P   A+       L  + L +   +R + L  R+ A LS    + V  LL +
Sbjct: 237 LGVSAMP-SLAMPNADHPTLVSVPLIEPQVTRTLGLVYRRGASLSPAAEKFVSILLQK 293