Pairwise Alignments

Query, 380 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  272 bits (695), Expect = 1e-77
 Identities = 151/373 (40%), Positives = 224/373 (60%), Gaps = 2/373 (0%)

Query: 5   LTEDQISLRDTARRFAEGEVLPRAAAIDREDKFDRVLYRGMAELGLFGVSLPEAAGGSGF 64
           + ++Q  + D  R FA+  + P A   D++ +F +     MAELGLFG+ +PE  GGS  
Sbjct: 3   VNDEQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDT 62

Query: 65  DTVSTCLVMEELARCSGAIGNAFAIPVEAALF-LHHHGNESQKA-LIPGILDGSIVMATA 122
             V+  + +EE+A   GA     ++        +   GNE QK   +  +  G+++ A A
Sbjct: 63  GYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFA 122

Query: 123 MSEPDYGSDVASITTTARAVDDGWVLNGTKAWVTLGGVADRIMVFARTGKEAGHKSISCF 182
           ++EP  GSD +S+ T AR   D +VLNG+K ++T G  A  ++VFA T  EAG + IS F
Sbjct: 123 LTEPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAF 182

Query: 183 MVDAHQAGVSRGKNEELLGMHGLEDCQIVLQDVHVPRTALIGAENEAFKTAMGNFNFSRL 242
           +V     G    + E+ LG H  + CQIV  +V VP    +GAE E +K A+ N    R+
Sbjct: 183 IVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRI 242

Query: 243 LMSSMALGMAQAAMEDAVAYATTRKQFGQPIMNFQAIQFMVADMSTDIAAARLLIHHGAR 302
            ++S A+GMA+AA E A  YA  R+ FG+P++  QA+ F +ADM+T I+ AR ++ H A 
Sbjct: 243 GIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAA 302

Query: 303 LQDAGRSIAKEGAQAKLFTTDMAMRHVSNALQIHGGNGYSRDYRIERIFRDVRLAQIYEG 362
           L+DAGR    E + AKLF ++MA +  S+ALQ  GG GY  D+ +ERI+RDVR+ QIYEG
Sbjct: 303 LRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYEG 362

Query: 363 TNQIQRLIISRQV 375
           T+ IQR++I+R +
Sbjct: 363 TSDIQRMVIARNL 375