Pairwise Alignments

Query, 280 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 260 a.a., lysine-arginine-ornithine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 25/245 (10%)

Query: 30  SAEHLTAPGKLQMSTNPTLPPQQFVDSKGELQGLNIELGRAVAKHLCLEPVFVRMDMPPM 89
           +  +   P  +++ T+ T  P    D+KG+  G +I+LG  + K + ++  +V  D   +
Sbjct: 18  AGSYAALPQTVRIGTDATYAPFSSKDAKGDFVGFDIDLGNEMCKRIAVKCTWVGSDFDAL 77

Query: 90  VPALQAGRFDVINTGLFWTEERSKLMFQVPYGQQSMSIYTVPNSKLVVNKFEDLSGHVVG 149
           +P+L+A + D I + L  TE+R + +        + S    P    +    + L G  VG
Sbjct: 78  IPSLKAKKIDAIISSLSITEKRQQEIAFSDKLYAADSRLIAPKGSPIKPTIDSLKGKHVG 137

Query: 150 IETGTYAERKSRESNAAMVAKGMAPIDFRTFATASETTAALRAGQLEAGINIDETAIAFE 209
           +  G+  E     +NA    KG   +D   +       + L AG+L+A    DE A +  
Sbjct: 138 VLQGSTQE---GYANATWREKG---VDVVAYQNQDLIYSDLAAGRLDAAFQ-DEVAAS-- 188

Query: 210 ERGIVKIRASGLY---------------GTDITLSFRDRAVAEAVAQALTDLKADGTYDK 254
             G +K  A   Y               GT I L   D  +  A  +A  +L+ DGTYDK
Sbjct: 189 -EGFLKQPAGKDYAFAGPSVKDKKYFGDGTGIGLRKDDTELKAAFDKAFAELRKDGTYDK 247

Query: 255 LFDKF 259
           L  K+
Sbjct: 248 LAKKY 252