Pairwise Alignments

Query, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 221 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  168 bits (426), Expect = 7e-47
 Identities = 89/209 (42%), Positives = 130/209 (62%)

Query: 7   FQNAQDFLPILLQGAVVTVQVTVLAFLLSSALGLALALMKLSPVRALSWAGSVIVNVIRG 66
           FQ A D  P LL+GA  TV +++        LG  LALM+LS  + +SW   V V+  RG
Sbjct: 5   FQLALDSAPFLLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLVSWLARVYVSFFRG 64

Query: 67  LPIIVQLFYIYFVLPEFGVQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQA 126
            P++VQLF IY+ LP+ G++L    A +IG  +  +AY  E  RA I +++ GQ EAA +
Sbjct: 65  TPLLVQLFLIYYGLPQVGIELDPIPAAMIGFSLNMAAYACEILRAAIGSIERGQWEAAAS 124

Query: 127 MGMRSALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQ 186
           +GM  A  +RR ILPQA R ALPP GN+ + ++KD++L +TI V E+ R  QL+++ TF+
Sbjct: 125 IGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSARTFE 184

Query: 187 NMTVYTLVALLYLLMSLPLVYGLRRLEKR 215
             T+Y   AL+Y +++  L +   RLE R
Sbjct: 185 IFTMYLSAALIYWILASILAHLQNRLEDR 213