Pairwise Alignments

Query, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 219 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  142 bits (357), Expect = 7e-39
 Identities = 84/205 (40%), Positives = 116/205 (56%)

Query: 13  FLPILLQGAVVTVQVTVLAFLLSSALGLALALMKLSPVRALSWAGSVIVNVIRGLPIIVQ 72
           +LP L +G V+++QVT ++  L   LGL LAL   SP R L +   V+V + RG P ++ 
Sbjct: 11  WLPELWKGFVLSMQVTAVSLGLGVVLGLLLALGVSSPSRWLRYPSLVVVELGRGAPALIL 70

Query: 73  LFYIYFVLPEFGVQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGMRSA 132
           L Y YF LP   + LT+F A  + +    +AY +E  R GIE+V  GQ EAA+ +G+   
Sbjct: 71  LQYFYFGLPSVNLTLTSFWAAALAMAYCTAAYTSEIIRGGIESVAAGQTEAAEVIGLNRF 130

Query: 133 LIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMTVYT 192
             +R VILPQA R+ALP      +MM + SSL  TI + E+      I SSTF+ M V  
Sbjct: 131 DALRFVILPQALRVALPSLLGFSIMMFQASSLCFTIALPEIVSRASSIGSSTFEYMPVLI 190

Query: 193 LVALLYLLMSLPLVYGLRRLEKRFA 217
           L  L+Y  +  P   G+  LEKR A
Sbjct: 191 LAGLMYAAVCAPATLGVAALEKRLA 215