Pairwise Alignments

Query, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 218 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  155 bits (393), Expect = 4e-43
 Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 2/213 (0%)

Query: 12  DFLPILLQGAVVTVQVTVLAFLLSSALGLALALMKLSPVRALSWAGSVIVNVIRGLPIIV 71
           D LP++LQGA VT+Q+T    LL+       AL K+S  R L W   V + + RG  ++V
Sbjct: 3   DLLPLMLQGAWVTLQITFFGSLLAIVAATLAALGKMSTWRPLRWFCVVYIEIFRGTSLLV 62

Query: 72  QLFYIYFVLP--EFGVQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGM 129
           QLF+++FVLP   F ++L+ +   ++GLG+   AY AE  R  I +V  GQ EA  A+  
Sbjct: 63  QLFWLFFVLPLPPFNLELSPYTVAIVGLGLHIGAYGAEIMRGAINSVAKGQYEACTALNF 122

Query: 130 RSALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMT 189
           R     RR+ILPQA   A+ P  N L+ +LK++SLVS IT+A+++   + +  +TF+ + 
Sbjct: 123 RPFTRFRRIILPQALLAAMGPGTNLLIELLKNTSLVSLITLADLSFRARQLDQATFETLK 182

Query: 190 VYTLVALLYLLMSLPLVYGLRRLEKRFAAGRKQ 222
           V+ L  L+Y +M+  +   +RRLE+  A GR Q
Sbjct: 183 VFALALLMYFVMAQAINLAMRRLERHLARGRVQ 215