Pairwise Alignments

Query, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 218 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  172 bits (435), Expect = 6e-48
 Identities = 88/206 (42%), Positives = 134/206 (65%)

Query: 10  AQDFLPILLQGAVVTVQVTVLAFLLSSALGLALALMKLSPVRALSWAGSVIVNVIRGLPI 69
           A   LP L + A+ T+ VT+L F ++  LGL LA+ + S    +SW    ++  IR  P+
Sbjct: 9   AIQLLPELFRAALNTIGVTLLGFAIAIVLGLFLAIGRRSARIWISWPIGGVIEFIRSTPL 68

Query: 70  IVQLFYIYFVLPEFGVQLTAFQAGVIGLGIAYSAYQAENFRAGIEAVDPGQREAAQAMGM 129
           ++Q++++Y+VLP +GV LTA Q GV+G+G+ Y+ Y AE +R+G++AV  GQ EA  A+ M
Sbjct: 69  LIQVYFLYYVLPNYGVSLTAMQVGVLGIGLHYACYLAEVYRSGLDAVPRGQWEAVTALNM 128

Query: 130 RSALIMRRVILPQAFRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFQNMT 189
             +L  R +ILPQA R  LPP GN LV MLKD+ ++S ITV E+ +  + I S TF+ + 
Sbjct: 129 SPSLAYRNIILPQALRPILPPVGNYLVAMLKDTPVLSAITVVEIMQQAKNIGSETFRYLE 188

Query: 190 VYTLVALLYLLMSLPLVYGLRRLEKR 215
             T+V + +L +S+ L Y +RR+E R
Sbjct: 189 PITMVGVFFLALSIVLAYLVRRVEAR 214