Pairwise Alignments

Query, 326 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score =  117 bits (292), Expect = 5e-31
 Identities = 86/290 (29%), Positives = 133/290 (45%), Gaps = 8/290 (2%)

Query: 14  LIRVLHTVLTDRSVSRAAIRLGMYQPAVSAALKRLRELSGDPLLVRSGSGMVPTDAGLRM 73
           L+++   +   RSV+RAA +LG  QP +S  L RLRE   DPL VR+  GM PT    ++
Sbjct: 12  LLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQL 71

Query: 74  IEPAASILRAAEMLFSDARGFDPQSAATTFRIAASDYMDPLFLPMLVAQVKRDAPLCQIE 133
           I P   +L +   L +    F   +A   FR+  SD      LP ++  ++  AP   I 
Sbjct: 72  IGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAP--GIR 129

Query: 134 IHALSPDSDYHGHLALGQVDLVIG--NWLKPPEDLHMARLFGDEVVSLVNKDHPAVRRGW 191
           + A   D +    L  G+ DL IG   WL     ++   LF  + V L N  HP +  G 
Sbjct: 130 LEAARIDGNTESALESGEADLAIGFVPWL--GGGMYQQVLFEQDWVCLSNPQHPRLGDGM 187

Query: 192 DLETWLAAEHIAPTPMHPGGRGIIDQMLDELGRQRNITARCAHFGLIPDMVASSLLVLTT 251
            LE + A  H+  +     G+ +++  L   G +R I      F  +  ++ ++ L+ T 
Sbjct: 188 SLERYRAEGHVQIS--FGTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGTL 245

Query: 252 GRQYCERFAARLPLAILECPVALPRLMYYQLWHERTHSSSSARWLRECIK 301
            R   +  A    L + +CP  +      Q WH R H  +  RWLRE ++
Sbjct: 246 PRHIGQTLADMHGLQVHDCPFEVEGFTVKQHWHARYHQDNGNRWLREVVR 295