Pairwise Alignments

Query, 351 a.a., TRAP transporter solute receptor, unknown substrate 3 from Variovorax sp. SCN45

Subject, 371 a.a., TRAP-type C4-dicarboxylate transport system from Magnetospirillum magneticum AMB-1

 Score =  155 bits (391), Expect = 2e-42
 Identities = 105/340 (30%), Positives = 153/340 (45%), Gaps = 9/340 (2%)

Query: 16  AIAIAATAALALCAPATQAQDKPVQLKLSSWVPAQHPLNP-ALQAWADDIKKESGGTITA 74
           A+++AA       A    A D+ V LK + ++P   P +   +  W D +  ESG  I  
Sbjct: 28  ALSLAALLGALPFAHQAAAADEVV-LKFAHFLPPVAPAHAQVIGPWCDRVAAESGNRIKC 86

Query: 75  ILFPSEQLGKAFDHY-DMARDGIADFSYVNPGYQPGRFPVMAGASLPFLFSNGKEGSAAI 133
            +FP+ QLG       D  R+G+AD  +  PGY  GRFP +    LPF+ +N  +GS   
Sbjct: 87  QIFPAMQLGGTPSQLVDQVRNGVADIVWTAPGYSAGRFPAIEALELPFMVANALDGSRMT 146

Query: 134 DAWYRNYAAKEMKDVKYCFAFVHDPGTFH-SRKKIVVPGDVKGLKVRPATSTVGQLITSL 192
             +Y  +A  E    K     +   G FH +  ++    +VKGLK+R  T    + + SL
Sbjct: 147 WDYYNQFAKDEFAAYKVLAVHIDGGGLFHTANTEVKSLAEVKGLKLRTPTRLAAKTLQSL 206

Query: 193 GGTNVQASAPESRDMLERGVADAITFPWGSIGLFGIDKVVKYHMDAP-----LYVTPFVW 247
           GG  V     +  D + +GV D    PW  +    ID+V KYH+  P        T    
Sbjct: 207 GGVPVSMPPSQVADAIAKGVVDGGLLPWELMRPTKIDEVTKYHIAPPPGRPFPVATVLSV 266

Query: 248 VMNKGKYDAMSTAQKKVIDDHCTSEWAQKVAGPWADFEFAGHAKMAALPGHEIYKLTPEQ 307
           +MNK KYD++    K VID +      +     W D   A     A +PG ++  L P  
Sbjct: 267 LMNKAKYDSLPADLKAVIDRNSGPVLVEAFGKVWDDVTAANLKYAATIPGTQVTNLEPAP 326

Query: 308 LDAWRKAAAPSEAQWAESVKKVGEDPKAVMDALKASLAKY 347
             A R AA P E +W + V     D +A+    +A  AKY
Sbjct: 327 YQAMRDAAKPVEEEWVKDVTARKLDGQALAAGARALSAKY 366