Pairwise Alignments

Query, 433 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 3 from Variovorax sp. SCN45

Subject, 426 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  236 bits (602), Expect = 1e-66
 Identities = 145/430 (33%), Positives = 231/430 (53%), Gaps = 11/430 (2%)

Query: 4   DAVAVLGFVALFVLMLLRVPVGMAMGLVGVTGYSYLVGPGPALKLVGQTSMRTVTDYTFG 63
           DA+ +LG  +   L+L+ +PV  A+GL  + G  ++  P  AL +        V  ++  
Sbjct: 2   DALILLG--SFIALILIGMPVAYALGLSALIGAWWIDIPFQALMIQVAGG---VNKFSLM 56

Query: 64  VIPMFMLMGALVSVSGVSRELFKAANSMIGHLRGGLGVATVVACGGFAAICGSSVATAAT 123
            IP F+L GA+++  G+SR L   A  ++G +RGGL +  ++A   F AI GSSVA  A+
Sbjct: 57  AIPFFVLAGAIMAEGGMSRRLVAFAGVLVGFVRGGLSLVNIMASTFFGAISGSSVADTAS 116

Query: 124 FSAVAYPEMRRFNYPQSFSTGVIAAGGTLGAILPPSTVLAVYAILT--QQDIGKLFMAGI 181
             +V  PEM R  YP+ F+T V  +G     + PPS    +Y++       I  LFMAG+
Sbjct: 117 VGSVLIPEMERRGYPREFATAVTVSGSVQALLTPPSHNSVLYSLAAGGSVSIASLFMAGV 176

Query: 182 VPGILAMAMYVMTIAIIVKLRPDWLPGGEIKPWSERVKDLKNVWAPLVLFVFVIGGLYGG 241
           VPG+L  A  ++   I  K R    P GE+ P  + +K   +    L+  V ++GG+  G
Sbjct: 177 VPGLLMSACLMVLCLIFAKKRN--YPKGEVIPLKQALKICADALWGLMAMVIILGGILSG 234

Query: 242 FFTPTEAGGVGASGAFILGL-VRRKLDGPKIREALLSATRTAAAVFTVLIGALLFGYFLT 300
            FT TE+  +    AF + + + R     ++ + +    RT + V  ++  A  FGY +T
Sbjct: 235 IFTATESAAIAVLWAFFVTMFIYRDYKWSELPKLMHRTVRTISIVMILIAFAASFGYIMT 294

Query: 301 ITQSPQKLTEFLTGLGIGRYGVLALIMLMYLVLGCLMDAMAMIILTVPIIYPVIVHLGFD 360
           + Q P K+T     L   RY +L  I  M L+LG +MD   +I++  PI+ PV++ +G D
Sbjct: 295 LMQIPAKITTLFLTLSDNRYVILMCINAMLLLLGTVMDMAPLILILTPILLPVVLGIGVD 354

Query: 361 PIWFGVIIVMTVELGLIHPPVGMNVFVIKSVVKDVSFTTIFKGVLPFIVTDIVRLVILIA 420
           P+ FG+I+++ + +GLI PPVG  +FV  +V K VS     K +LPF     + L+ +  
Sbjct: 355 PVHFGMIMLVNLGIGLITPPVGAVLFVGAAVGK-VSIEKTVKALLPFYGVLFLVLMAVTY 413

Query: 421 FPIIALWLPT 430
            P ++LWLP+
Sbjct: 414 IPALSLWLPS 423