Pairwise Alignments

Query, 217 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  116 bits (290), Expect = 2e-30
 Identities = 64/169 (37%), Positives = 101/169 (59%), Gaps = 2/169 (1%)

Query: 25   AMRQLEAAGSVLANVP-IAINVSPREMAQLAVDDIVLGMLKTRGIAPARLQIEITEEVAL 83
            A RQL+A       VP +++N+S R+ +   +   +  +L+  G+ PA L++E+TE + +
Sbjct: 1091 ASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEESGLPPACLELELTESILM 1150

Query: 84   -DTHATRSRLSALSAAGVTIVVDDFGVGYSSLASLRSEYVRQVKIDRSFILGLAASPGNV 142
             + +     L++L   G++I VDDFG GYSSL  L+   +  +KIDR+F+ GL     + 
Sbjct: 1151 REVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDA 1210

Query: 143  VLVDSIVQLGRSLNIQVVAEGVETQEELDVLRTLGCTLVQGYHLARPAP 191
             +  +I+ +  SLN+ V+AEGVET E+L+ LR  GC  VQGY   RP P
Sbjct: 1211 QIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMP 1259