Pairwise Alignments

Query, 256 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 256 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  117 bits (292), Expect = 3e-31
 Identities = 68/245 (27%), Positives = 125/245 (51%), Gaps = 6/245 (2%)

Query: 8   ERWSPWLLLVAVILLWQIICAGFEVSDFIFPSPLRIWNQFWEFKEIIAGHAWRTFWVTMA 67
           ER+   L  +A++ LW+       V    FP P  I + F     + +G  W     ++ 
Sbjct: 10  ERFIGLLTPLALLGLWEAAARMGLVDARFFPPPSSIVHTFGAL--VASGELWTNLLASLR 67

Query: 68  GFGLAIVVG----VLLGFVIGSSRIAYAAIYPLMTAFNALPKAAFVPILVVWFGIGAGPA 123
              L +++G    + LG  +G S+   AAI PL++A   +PK+A +P++++ FG+G    
Sbjct: 68  RLFLGMLLGGVPALFLGLAMGISKPLRAAIDPLISATYPIPKSAILPLVLLIFGLGEMSK 127

Query: 124 ILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLMKIGLPRSMPYFFGSLKV 183
           ++   L +F+PI++N   G+A ++    DV     A RW V   I LP ++P     +K+
Sbjct: 128 VVMVALGAFYPILINTVMGVANIDKIYLDVGHNYRASRWQVFRTIALPGALPSIMAGVKL 187

Query: 184 AITLAFVGTTVSEMTAANEGIGYLLISAGSAMQMGLAFAGLMVVGAMAMLMYELFSVIEK 243
           A+ +  +   +SEM AA++GIGY++ +A   + +   + GL+V+  +  +   +   IE+
Sbjct: 188 AMGMGLILIAISEMVAASDGIGYMIWNAWQVLTVDTMYVGLLVIALLGFVFSVILDEIER 247

Query: 244 HTTGW 248
               W
Sbjct: 248 MLIPW 252