Pairwise Alignments

Query, 256 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 56/230 (24%), Positives = 111/230 (48%), Gaps = 6/230 (2%)

Query: 8   ERWSPWLLLVAVILLWQIICAGFEVSDFIFPSPLRIWNQFWEFKEIIAGHAWRTF----W 63
           +R +PW L V ++ +WQ+  +   +S  I P+P  + +   E   + +G  W       W
Sbjct: 11  QRLAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVEL--VRSGEIWTHLAISGW 68

Query: 64  VTMAGFGLAIVVGVLLGFVIGSSRIAYAAIYPLMTAFNALPKAAFVPILVVWFGIGAGPA 123
               GF +   +G++LGF+ G S      +   +     +P  A +P++++WFGI     
Sbjct: 69  RAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAK 128

Query: 124 ILTAFLISFFPIMVNIATGLATLEPELEDVLRVLGAKRWDVLMKIGLPRSMPYFFGSLKV 183
           I    L + FPI +N   G+  ++P L ++ R  G   + +  ++ LP ++P     ++ 
Sbjct: 129 IFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSILVGVRF 188

Query: 184 AITLAFVGTTVSEMTAANEGIGYLLISAGSAMQMGLAFAGLMVVGAMAML 233
           A+   ++   V+E  +AN GIGYL ++A   +Q  +    +++   +  +
Sbjct: 189 ALGFMWLTLIVAETISANAGIGYLAMNAREFLQTDVVVLAIVLYAVLGKI 238