Pairwise Alignments

Query, 229 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

Subject, 220 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  139 bits (349), Expect = 6e-38
 Identities = 83/223 (37%), Positives = 123/223 (55%), Gaps = 10/223 (4%)

Query: 1   MRILLVEDEVDLAQALASALRQNQALVDVASSLREAEEAALSAQH---DVIVLDRGLPDG 57
           MR+LLVED++ L + +   LRQ    +D    LR+      + QH   D+++LD GLP  
Sbjct: 1   MRLLLVEDDIALGEGICDGLRQEGYTLDW---LRDGVSGLHALQHETFDLVILDLGLPRM 57

Query: 58  DGLSLVAFLRQNQVATAVLVLTAMTDVAERVLSLDGGADDYLAKPFSMDELMARVRALAR 117
           DGL L+  LR    +  VL+LTA   + +R+  LD GADDYL KPF ++EL AR+RAL R
Sbjct: 58  DGLELLRRLRAGGDSLPVLILTARDALDDRIAGLDAGADDYLVKPFDLNELKARLRALLR 117

Query: 118 RPAVRANFTMTLGQLSFDHHMRQAHVGDLNLTLPRRELLVLEALLEHRGRTVLRETMQER 177
           R   RA   +    +S D   +Q     + + L  +E ++L  LL   G+   RE + + 
Sbjct: 118 RSVGRAKVLIEHAGVSLDPTTQQVQYNGVEVVLTPKEYVLLHELLAQPGKVFTRERLTQL 177

Query: 178 VYGHKDEIQSNALDTHVSRLRSKLDKAGAQVEIHAIRGVGYLI 220
           +YG  +E +SN L+ ++  LR KL        I  +RG+GYL+
Sbjct: 178 LYGWDEEPESNTLEVNIYHLRKKLFNG----LIRTVRGIGYLV 216