Pairwise Alignments

Query, 377 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 271 a.a., sigma factor sigB regulation protein rsbQ from Pseudomonas simiae WCS417

 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 86  GNTGPTIVLLAGLGGNARCFDSLAPALAARSRVVAISRRGYGLSDKPLPVKSATQHYEVE 145
           GN   T+V   G G N   ++ LAP  + R RVV     G GLSD  L      ++  ++
Sbjct: 13  GNGSSTLVFSHGFGCNQAMWNYLAPQFSERFRVVMYDLVGAGLSD--LSAFDKAKYSSLD 70

Query: 146 TLGSDLKAVLDDLGLLRVVLGGHSIAGNELTYFAGRHPERVRGLIYLDTTFDY-TKDGER 204
               DL  ++D   +  V+L  HS++    T    + P R+   + +  +  Y   DG  
Sbjct: 71  GYARDLNEIIDAFAVGPVILVSHSVSAMISTLADRQAPNRIAAHVMIGPSPRYIDADGYV 130

Query: 205 GG 206
           GG
Sbjct: 131 GG 132