Pairwise Alignments

Query, 219 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  135 bits (341), Expect = 7e-37
 Identities = 75/200 (37%), Positives = 127/200 (63%), Gaps = 2/200 (1%)

Query: 15  LLHGAGLTVLLTVLTMLVAVPLGIVLALMRLSSSKALSGASQVFVEFFRNLPLILVVYWA 74
           L+ G   T+ L+V++ ++ + +G+   L RLSS+  L   S ++VE  R  PL++ ++  
Sbjct: 117 LMWGLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIF 176

Query: 75  FYVMPVLMHIEFSAFTTGLVALCLNVSAYNAETFRAGINSIRKGQMEAAIAMGMSRWQAM 134
           ++ +  ++++  S    G+ AL L   AY AE  RAG+ SI +GQ EAA ++G+S  Q+M
Sbjct: 177 YFFIGTVLNL--SREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQSM 234

Query: 135 KKVVIPQAWRRVLPVLASTWVSLFKDTSLVSVIAVGELAHVALQIRSSSFRVLEMLTAMA 194
           + VV+PQA++RVLP LA  ++SL KDTSLVSVIA+ EL     ++ ++SF   E+L  +A
Sbjct: 235 RHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVA 294

Query: 195 VIYWLMGYPQAKLVDWIQKK 214
            +Y L+  P +K+   ++++
Sbjct: 295 GLYLLINLPLSKMASRLERR 314