Pairwise Alignments

Query, 408 a.a., PQQ-dependent oxidoreductase, gdhB family from Variovorax sp. SCN45

Subject, 371 a.a., predicted dehydrogenase (NCBI) from Escherichia coli BW25113

 Score =  180 bits (457), Expect = 5e-50
 Identities = 121/375 (32%), Positives = 180/375 (48%), Gaps = 48/375 (12%)

Query: 43  QFDLPWRIAFLPDGR-MLITEKIGRL-YLATQSGQKLEVTGVPPVLYENQNGLLGVYLAP 100
           + D PW +AFLPD   MLIT + G L +     G    ++GVP V    Q GLL V LAP
Sbjct: 33  KLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAP 92

Query: 101 SFSSDGAIYLTYSEPGQIRGTSSLALARATLKIGAGTASLEDLKVIWHD-PVKGKGGQVG 159
            F+    I+L+YSE G   G +  A+     ++    + + D + ++   P    G   G
Sbjct: 93  DFAQSRRIWLSYSEVGD-DGKAGTAVGYG--RLSDDLSKVTDFRTVFRQMPKLSTGNHFG 149

Query: 160 AAVAFSPDQKFLFLTAGDRQRFTPAQDPNQPAGKILRLTLDGKPAPGNPMEGKTGARSVP 219
             + F   + +LF+  G+  +   AQD ++  GK++RLT  G+    NP   ++GAR   
Sbjct: 150 GRLVFD-GKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGAR--- 205

Query: 220 VIDPPRDTEAAKTAPVVRTYVFDGPNLTPSETWSSGHRTPYGLAFAP-DGRLWELEHGPR 278
                                        +E WS G R P G+A  P    LW  EHGPR
Sbjct: 206 -----------------------------AEIWSYGIRNPQGMAMNPWSNALWLNEHGPR 236

Query: 279 GGDELNLIEPGKNYGWPLVSYAVNYDGVPIASPDTRPDLV----KPVIYWTPVLAPGNLM 334
           GGDE+N+ + GKNYGWPL ++ +NY G  I  P+ + ++V    +PV YW    A   + 
Sbjct: 237 GGDEINIPQKGKNYGWPLATWGINYSGFKI--PEAKGEIVAGTEQPVFYWKDSPAVSGMA 294

Query: 335 FYSGAMFPQWKGSAFATGLVSRALHRIEVHGATATPAEHWTV--GFRVRAVEQAPDGALW 392
           FY+   FPQW+   F   L  + +  + V+G   T         G R+R V   PDG L+
Sbjct: 295 FYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLY 354

Query: 393 LIEDDHEGGLYRLTP 407
           ++ D+  G L +++P
Sbjct: 355 VLTDESSGELLKVSP 369