Pairwise Alignments

Query, 524 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  185 bits (470), Expect = 3e-51
 Identities = 168/545 (30%), Positives = 251/545 (46%), Gaps = 51/545 (9%)

Query: 1   LLPPATHEIANVG-ALVSRAARIHARRLAVTSAARAVTYQQLEQRSNRLANALCGLGLQR 59
           L+P A + +A    + + R A ++    AV   A    +Q+  QR  RLA+AL G G+ R
Sbjct: 8   LMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALAGRGIGR 67

Query: 60  GERVGVYLPNCIEIVELELACYKAALVKAPMNSRLAPVEVAEVIANSEAALVVTTAERAE 119
           G+ V V LPN   ++E          V   +N RL    +A ++ + EA +++T  E   
Sbjct: 68  GDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDRE--- 124

Query: 120 SFLPHLKGAAPRL----LLLDAAQDTPASYEGQMARASDSFTAARVHADELA-------- 167
            F   ++GA   L    L++D   D P   EG+     D          E A        
Sbjct: 125 -FHAVIEGALALLEHPPLVVDV--DDPEYGEGRAVSQLDYEALLNEGDPEFAWEWPDDEW 181

Query: 168 ---VLHYTSGSSGVLKAAMQTF-GNRLAQLRKFLMRADNPRPGDLLGLVGPITHASGMQL 223
               L+YTSG++G  K  +    G  L  L   +  A   RP  L  L  P+ H +G   
Sbjct: 182 QAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTL--PMFHCNGW-- 237

Query: 224 VPALCSGATIRLFAG-------FEPARFIAEMKRERVTHTFMVPTMINMLLAEVQGQYRP 276
               C   TI   AG        +P + +  ++  +V+H    P ++N L+   +     
Sbjct: 238 ----CYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAA 293

Query: 277 LPD-LHRLGYGAAPMAPARIMQAMDVFGPVLSQGYGAGETTSGVCGLSVDDH-----LFA 330
           +   +  +  GAAP  PA+++ A++  G  ++  YG  E    V   +  D      L  
Sbjct: 294 IEHPVQAMVAGAAP--PAKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEE 351

Query: 331 RAAMPGRLASCGRPFLESQVDICDDDGQPVA--AGEIGEIVVGGADVFAGYWRAPQLTAE 388
           RA +  R      P L+  +       QPV      +GEI + G  V  GY + P+ TAE
Sbjct: 352 RARIKSR-QGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAE 410

Query: 389 VLKNGRYHTGDLARADDEGYIYIVDRKKDMVISGGFNVYPSEVEAVLYQHAAVDEACVFS 448
             + G +HTGDLA    +GYI I DR KD++ISGG N+   EVE  LY+H+AV EA V +
Sbjct: 411 AFRGGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVA 470

Query: 449 VPDDKWGEAVAAHIVRKPGAV-LDAAALDAFCAERLAGFKRPRRIEFVEALEKNANGKIA 507
            PD+KWGE   A +  KPG      A + ++C E LAGFK P+ + F E L K + GKI 
Sbjct: 471 RPDEKWGETPCAFVALKPGREDTREADITSWCREHLAGFKVPKTVVFGE-LPKTSTGKIQ 529

Query: 508 RKAIQ 512
           +  ++
Sbjct: 530 KYVLR 534