Pairwise Alignments

Query, 524 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  202 bits (515), Expect = 2e-56
 Identities = 180/546 (32%), Positives = 260/546 (47%), Gaps = 40/546 (7%)

Query: 1   LLPPATHEIANVGA---------LVSRAARIHARRLAVTSAARAVTYQQLEQRSNRLANA 51
           ++P   HE+A   A          + RAA+++ +R AV   AR  +Y+QL +RS  LA+A
Sbjct: 2   MVPTLEHELAPNEANHVPLSPLSFLKRAAQVYPQRDAVIYGARRYSYRQLHERSRALASA 61

Query: 52  LCGLGLQRGERVGVYLPNCIEIVELELACYKAALVKAPMNSRLAPVEVAEVIANSEAALV 111
           L  +G+Q GERV +  PN  E++E       A  V   +N RL    +A ++ +  A ++
Sbjct: 62  LERVGVQPGERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVL 121

Query: 112 VTTAER---AESFLPHLKGAAPRLLLLDAAQDTPAS------YEGQMARASDS--FTAAR 160
           +   E    A   L  L  A P L+ +D  Q   A       YE  +A+   +   +A +
Sbjct: 122 ICDREFGAVANQALAMLD-APPLLVGIDDDQAERADLAHDLDYEAFLAQGDPARPLSAPQ 180

Query: 161 VHADELAVLHYTSGSSGVLKAA-MQTFGNRLAQLRKFLMRADNPRPGDLLGLVGPITHAS 219
                +A+ +YTSG++G  K   +   G  L      L+    PR   L  L  P+ H +
Sbjct: 181 NEWQSIAI-NYTSGTTGDPKGVVLHHRGAYLNACAGALIFQLGPRSVYLWTL--PMFHCN 237

Query: 220 GMQLVPALC-SGATIRLFAGFEPARFIAEMKRERVTHTFMVPTMINMLLAEVQGQYRPLP 278
           G     A+  SG T       +P    A +    VTH    P +++ML+        P+P
Sbjct: 238 GWSHTWAVTLSGGTHVCLRKVQPDAINAAIAEHAVTHLSAAPVVMSMLIHAEHASAPPVP 297

Query: 279 DLHRLGYGAAPMAPARIMQAMDVFGPVLSQGYGA----GETTSGVCGLSVDD-HLFARAA 333
                G GAAP  P+ ++ AM+  G  ++  YG     G +T  +    VD+  L ARA 
Sbjct: 298 VSVITG-GAAP--PSAVIAAMEARGFNITHAYGMTESYGPSTLCLWQPGVDELPLEARAQ 354

Query: 334 MPGRLASCGRPFLESQVDICDDDGQPVAAG--EIGEIVVGGADVFAGYWRAPQLTAEVLK 391
              R      P LE    +  D G+PV A    +GE+VV G  V  GY   P+ T   L 
Sbjct: 355 FMSR-QGVAHPLLEEATVLDTDTGRPVPADGLTLGELVVRGNTVMKGYLHNPEATRAALA 413

Query: 392 NGRYHTGDLARADDEGYIYIVDRKKDMVISGGFNVYPSEVEAVLYQHAAVDEACVFSVPD 451
           NG  HTGDLA    +GY+ I DR KD++ISGG N+   E+E VLYQH  V EA V + PD
Sbjct: 414 NGWLHTGDLAVLHLDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPD 473

Query: 452 DKWGEAVAAHIVRKPGAVLDAAALDAFCAERLAGFKRPRRIEFVEALEKNANGKIARKAI 511
            +WGE   A +  +  A+     L  +C ERLA FK PR +  V+ L K A GKI +  +
Sbjct: 474 SRWGETPHAFVTLRADALASGDDLVRWCRERLAHFKAPRHVSLVD-LPKTATGKIQKFVL 532

Query: 512 QTPYWA 517
           +   WA
Sbjct: 533 RE--WA 536