Pairwise Alignments

Query, 276 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 284 a.a., glutamine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 22/258 (8%)

Query: 5   KTLLAALLAAAFVG--QAAAQTVPVPAPGTSARIDAIKKAGVLRAAVLSN-PPWLVENTT 61
           K LL  L A A +      A+    PA    + ID IK    L   V ++ PP+   N  
Sbjct: 2   KKLLLPLFAVALLAGCDKKAEEPTKPAAAAVSAIDRIKARDKLIVGVFTDKPPFGFVNEA 61

Query: 62  GSGDAWAGPAWLLANEVAKQL---GVKLQAVPVSHETKVPVLASNQADMTISPLSVTPER 118
           G    + G    +  + AK L     K++ V V   +++P L S++ D+ ++ ++VTPER
Sbjct: 62  GR---YVGFDTDIGRQFAKDLLGDENKVEFVAVEPASRIPFLQSDKVDLILANMTVTPER 118

Query: 119 LKVVDFVTYSRTALCVFGRADNPKVANAKSVDDFNNPNITVAYFTGGGEENWVKKRFPNA 178
            + VDF   +   L V  +A  P  +  KS++D       V   TG   + W+ K  P+ 
Sbjct: 119 KEAVDF---TNPNLKVAVQALVPNDSAVKSLNDLATRTTIVT--TGTTADIWLTKNHPDW 173

Query: 179 KLRGVSTAGTAAPVEEIMAKRADITPINRVPWQALNRKVKGLKVLPDANNCQDSTEMATP 238
           KL  +     +  ++ + A R D    + +   +  ++  G +VL      ++      P
Sbjct: 174 KL--LKFEKNSESLQALSAGRGDAYAQDNLVLFSWAKQNPGYRVL------EEKLGDEAP 225

Query: 239 IGLAIDKNQPEYLNWLKA 256
           I  A+ K   E  +W+ A
Sbjct: 226 IAPAVKKGNIELRDWVNA 243