Pairwise Alignments

Query, 276 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 250 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 84/271 (30%), Positives = 119/271 (43%), Gaps = 40/271 (14%)

Query: 1   MTTTKTLLAALLAA-AFVGQAAAQTVPVPAPGTSARIDAIKKAGVLRAAVLSNPPW-LVE 58
           M T +TL+AA L+  AF G A        A G   R+          A   + PP   VE
Sbjct: 1   MNTRRTLVAAALSGFAFFGLAGM----AQAQGEPLRV----------ATDATFPPMEFVE 46

Query: 59  NTTGSGDAWAGPAWLLANEVAKQLGVKLQAVPVSHETKVPVLASNQADMTISPLSVTPER 118
           N   +G         L   + K LG K++ + +  +  VP L S + DM +S + +T ER
Sbjct: 47  NGKRTGFDVE-----LVEAIGKTLGRKIEWIDIDFKGLVPGLISKRFDMAVSGIYITDER 101

Query: 119 LKVVDF-VTYSRTALCVFGRADNPKVANAKSVDDFNNPNITVAYFTGGGEENWVKKRFPN 177
            KVVDF V Y    L V  +  N  +   K+  D N   ++V    G    ++ K++FP 
Sbjct: 102 KKVVDFTVPYYAGGLVVMVKDGNTAI---KTPADINGKKVSVQ--VGTKSVSYTKEKFPQ 156

Query: 178 AKLRGVSTAGTAAPVEEIMAKRADITPINRVPWQALNRKVKGLKVLPDANNCQDSTEMAT 237
            +L  V        + +I   RAD     +       R   GLKVLP+    Q +TE   
Sbjct: 157 VQLMEVEKNQEMFNLVDI--GRADAAVTGKPAAYQYVRTRGGLKVLPE----QITTE--- 207

Query: 238 PIGLAIDKNQPEYLNWLKAVNDQMKPKLDAD 268
             G+AI K+ PE     KAVN  ++ KL AD
Sbjct: 208 EYGMAIRKDTPEL---TKAVNGAIE-KLKAD 234