Pairwise Alignments

Query, 276 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 26/257 (10%)

Query: 8   LAALLAAAFVGQAAAQTVPVPAPGTSARIDAIKKAGVLRAAVLSN-PPWLVENTTGSGDA 66
           LA LL A  + QA A            ++  I++ GV+   +    PP+  ++  G    
Sbjct: 13  LALLLGAGLLSQAFA----------GEQLKTIQEKGVINVGLEGTYPPFSFQDENGK--- 59

Query: 67  WAGPAWLLANEVAKQLGVKLQAVPVSHETKVPVLASNQADMTISPLSVTPERLKVVDF-V 125
             G    L+  +AK+LGVK +  P   +  +  L S + D+ ++ ++++ ER K  DF  
Sbjct: 60  LTGFEVELSELLAKELGVKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSE 119

Query: 126 TYSRTALCVFGRADNPKVANAKSVDDFNNPNITVAYFTGGGEENWVKKRFPNAKLRGVST 185
            Y+ + +         +  N K   D     + V    G   E WVKK  P A +R  + 
Sbjct: 120 PYTVSGIQALILKKKAEQLNIKGAQDLAGKKVGVG--LGTNYEQWVKKDVPQADVR--TY 175

Query: 186 AGTAAPVEEIMAKRADITPINRVPWQALNRKVKGLKVLPDANNCQDSTEMATPIGLAIDK 245
               +   ++   R D   I+R+      +K K  ++  DA +  +S       G+A+ K
Sbjct: 176 EDDPSKFADLRNGRIDAILIDRLAALEYAQKAKDTELAGDAFSRLES-------GVALRK 228

Query: 246 NQPEYLNWLKAVNDQMK 262
            +PE L  +    D++K
Sbjct: 229 GEPELLAAINKAIDKLK 245