Pairwise Alignments

Query, 413 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Variovorax sp. SCN45

Subject, 308 a.a., periplasmic murein D-alanyl-D-alanine endopeptidase from Pseudomonas putida KT2440

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 90/284 (31%), Positives = 138/284 (48%), Gaps = 51/284 (17%)

Query: 20  LVSGTPAFAASHAAKPAAHKKPAAAAPAQAPVAGQSAVAGGPPALPAKAWLLMDFDSGEV 79
           L++GT    ++ AA+P A  +     P++  +A  SA             LL+D +S + 
Sbjct: 13  LLTGTATLPSTAAAQPPAQVQ---RDPSKLHLASGSA-------------LLIDLNSNQE 56

Query: 80  LASANPDEPLPPASLTKMMTSFLVEQALRSGKLKKDDLVS--VSQNAWCRGSSTESCMYL 137
           L S++ D  +P AS+TK+MT+ +V  A    KL  D++++  ++ N   +G  +     +
Sbjct: 57  LYSSHADRVVPIASVTKLMTAMVVLDA----KLPMDEMLTMTIANNPEMKGVYSR----V 108

Query: 138 PLNSQATVIDILRGIIVQSGNDASKAIAEHMAGTEEGFAKLMNAEAQRLGMTHTHFVNST 197
            L SQ    + L   ++ S N A+ ++A    G    F K MNA+A+ LGM HT +V  T
Sbjct: 109 RLGSQLDRRETLLITLMSSENRAANSLANAYPGGYPAFIKAMNAKARSLGMAHTRYVEPT 168

Query: 198 GLPDPDHKSSARDLAILARAIIRDSSEYYPIYAE----RE----FKYNGIKQGNRNALLY 249
           GL    + S+ARDLA L  A     S  YP+ +E    RE    F+      G RN    
Sbjct: 169 GL-STQNVSTARDLAKLLMA-----SRKYPMLSELSTTREKTVAFRKPNYTLGFRN---- 218

Query: 250 TDPTVDG-------LKTGHTQEAGFCLVTSSKRNGMRLITVILN 286
           TD  V+         KTG T EAG CLV  ++ +   +  VIL+
Sbjct: 219 TDHLVNKSNWDIKLTKTGFTNEAGHCLVLLTRMDNRPVAMVILD 262