Pairwise Alignments

Query, 178 a.a., no description from Variovorax sp. SCN45

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 63.9 bits (154), Expect = 1e-15
 Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 1/152 (0%)

Query: 16  HYVQLVRRLTRHLGCPDLASDALHDAWLRLADIDSFHLVGNPDAYVYRAACNAALDRLRS 75
           +Y +LV  L+  LG    A D  HDA+LR+ +      + +P A++YR A N  +DR R 
Sbjct: 4   YYRELVSFLSARLGSRQAAEDVAHDAYLRVLERTGSEQIEHPRAFLYRTALNLVVDRHRR 63

Query: 76  ARLRQHAHEADAELARVADHAPGPHHIAEARSDVMAVDRAMRHLPHRHRSILVGLRVHEM 135
             +RQ A   DA  A    H+    H  +    +  + +A+  L    R   +  ++  +
Sbjct: 64  QLVRQ-AEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKIEGL 122

Query: 136 SRQEVAIRQGLSLRRVDTVLDQALAYCAGHLR 167
           S Q++A R G+S   V+  +  A+ +C   +R
Sbjct: 123 SHQQIAERLGISRSLVEKHIVNAMKHCRVRMR 154