Pairwise Alignments

Query, 178 a.a., no description from Variovorax sp. SCN45

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 60.8 bits (146), Expect = 1e-14
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 3/151 (1%)

Query: 16  HYVQLVRRLTRHLGCPDLASDALHDAWLRLADIDSFHLVGNPDAYVYRAACNAALDRLRS 75
           HY +L+   TR L     A D  HDA++R+ +      V  P AY+++AA N A+D  R 
Sbjct: 10  HYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPR-EQVEQPRAYLHQAARNIAVDGFRR 68

Query: 76  ARLRQHAHEADAELARVADHAPGPHHIAEARSDVMAVDRAMRHLPHRHRSILVGLRVHEM 135
              RQ       E        P  +  A   +D  +V+RA+  LP   R + +  ++  +
Sbjct: 69  EDRRQALEREAFEEGATGSGDPEAYVHALELAD--SVERALAELPLNCRQVFIWQKLEGL 126

Query: 136 SRQEVAIRQGLSLRRVDTVLDQALAYCAGHL 166
           ++ E+A R GLS   V+  + + L +   HL
Sbjct: 127 TQAEIAERMGLSKNMVEKYMIRTLRHLREHL 157