Pairwise Alignments

Query, 167 a.a., Extracytoplasmic function (ECF) sigma factor VreI from Variovorax sp. SCN45

Subject, 198 a.a., RNA polymerase sigma-70 factor, Bacteroides expansion family 1 from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 50.4 bits (119), Expect = 2e-11
 Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 28  LGSSDLAGDALHDTWVRLAG-KSEIEPVRQPQAFLLNAATNIAVDRLRVEARMLSESQVD 86
           L S DLA D + DT+++L   ++ I+P +  +  ++  A  I ++ +R E R + +    
Sbjct: 44  LKSVDLANDVVQDTFLKLWNYRAHIDPSKPIKPLIVTFAKRIILNNIRDEKRKILKHL-- 101

Query: 87  DLFEVEDPAAGPAEALEARFELAALV-GAMERLPARQREILFAVRLEGLSRDELAERYGI 145
           ++FE  +  +   E      E   +   A+  LP R+RE+     ++G S +E AE  G+
Sbjct: 102 EIFENSNSFSNKTEEQVIYNETHQVYQAAVMALPERRREVFLLKSVQGKSNEETAEELGL 161

Query: 146 SVRMV----ARELQAAHEF 160
           S+  V     + LQA  EF
Sbjct: 162 SINTVKSQYTKALQAIREF 180