Pairwise Alignments

Query, 580 a.a., ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) / ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 281 a.a., choline / betaine / carnitine ABC transporter - membrane subunit from Pseudomonas putida KT2440

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 17/198 (8%)

Query: 68  TLMRMWIAFGFSLFFAVATGYLAAKSRTARAFILPALDVLQSVPVLGFLSATVAAF-MAL 126
           TL ++  A    +   V  G LAA        + P LD++Q+VP   +L  T+  F + +
Sbjct: 94  TLAQVTFATVVCVVIGVPLGILAAHKPMFYTAMRPVLDLMQTVPTFVYLIPTLTLFGLGV 153

Query: 127 FPGSLLGVECAAIFAIFTGQVWNMAFGFYHSMVTIPNDMQEAASTYGLTRAQRFRTVELP 186
            PG +  V    +FAI            Y  +  +P ++ +A   +G +R Q    +ELP
Sbjct: 154 VPGLISTV----VFAIAAPIRLT-----YLGICDVPQELMDAGKAFGCSRRQLLTRIELP 204

Query: 187 ASAHSLIWNSMMSFGGGWFFVAQSEAISVMNKDIKLPGLGSYMAQAIAQGDNTAALWAVV 246
            +  S+         G    +  S ++ V+   +   GLG  +  A+   D +    A +
Sbjct: 205 HAMPSIA-------AGVTQCIMLSLSMVVIAALVGADGLGKPVVNALNTADISLGFEAGL 257

Query: 247 AMIVLILVSDQLVWRPLL 264
           A+++L ++ D++  +P L
Sbjct: 258 AIVLLAIMLDRICKQPEL 275