Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 307 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  158 bits (400), Expect = 1e-43
 Identities = 102/302 (33%), Positives = 163/302 (53%), Gaps = 17/302 (5%)

Query: 1   MLDINILLPSVLNGLTTGAVYALIAVGLTLIYGVLHIINFAHGASLMLALYAVYFLKERW 60
           M +I      ++NGLT G+ YALIA+G T++YG++ +INFAHG   M+  Y  +      
Sbjct: 1   MPEIYHFFQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGL 60

Query: 61  GIDPYMALPIAIVGMF--------ALGYALQRIVINRAGHGKDENI-LLATLGIAIVMEN 111
            +    +LP+ +   F        A GY+++R+   R   G +  I L++ +G++I ++N
Sbjct: 61  AMMGIHSLPLLMTAAFLASIVVTSAYGYSIERVAY-RPLRGSNRLIPLISAIGMSIFLQN 119

Query: 112 LALLLFKSDTRSIDT----AYSLSTVAIGPAMIAVPKLVAFAGALVVSGVLFWIMGRTDL 167
             LL   S  +SI      ++S         +I+  +++ F   LV    L   + R+ L
Sbjct: 120 TVLLSQDSKDKSIPNLIPGSFSFGPGGAEEVLISYMQILVFVVTLVAMLGLTLFISRSRL 179

Query: 168 GRAIRAVAKEKEGAKLMGIDVDHVYAMSFGIGLACLGAAACFLLPAYY--VNPQVGGGFV 225
           GRA RA A++ + A L+GI+ +++ A++F IG A L A A  LL   Y  +NP  G    
Sbjct: 180 GRACRACAEDIKMANLLGINTNNIIALTFVIG-AALAAVAAVLLSMQYGVINPNAGFLVG 238

Query: 226 LVAFTIVVLGGMGSFVGALIGGFLVGVVESLGGLYLGESLGQIGIFAIFIGVVLFRPQGM 285
           L AFT  VLGG+GS  GA++GG ++GV E+ G    G+    +  F + + V+LFRP G+
Sbjct: 239 LKAFTAAVLGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGI 298

Query: 286 FG 287
            G
Sbjct: 299 LG 300