Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  140 bits (352), Expect = 4e-38
 Identities = 82/286 (28%), Positives = 149/286 (52%), Gaps = 5/286 (1%)

Query: 7   LLPSVLNGLTTGAVYALIAVGLTLIYGVLHIINFAHGASLMLALYAVYFLKERWGIDPYM 66
           +L  +L+G+  G +Y LIA+G  LIY     ++FA G  +ML  +  +     +G+  ++
Sbjct: 3   ILQLLLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAFAGMSLFGMPFWL 62

Query: 67  ALPIAIVGMFALGYALQRIVINRAGHGKDENILLATLGIAIVMENLALLL--FKSDTRSI 124
           A  +A+V M A G  L+ +VI         +I++ T+GIA V   +  ++    ++T ++
Sbjct: 63  AAILAVVAMAAFGVLLELVVIRSILGQPQFSIVMLTIGIAYVARGVITMVPGIGTETHTL 122

Query: 125 DTAYSLSTVAIGPAMIAVPKLVAFAGALVVSGVLFWIMGRTDLGRAIRAVAKEKEGAKLM 184
              Y      +G  ++ + +L       V+ G+LF +   + LG A++A ++ +  A  M
Sbjct: 123 AVPYKDQIWKLGELVVNLEQLAIIIATAVLCGLLFAMFRYSKLGIAMQASSQNQLAAYYM 182

Query: 185 GIDVDHVYAMSFGIGLACLGAAACFLLPAYYVNPQVGGGFV-LVAFTIVVLGGMGSFVGA 243
           GI V  +  + +G+  A    A   L P  +V+  +  GF+ L AF   V+GG GS  GA
Sbjct: 183 GIPVKRLNGLVWGLAAAVAAIAGMLLAPITFVHANM--GFIGLKAFPAAVVGGFGSLPGA 240

Query: 244 LIGGFLVGVVESLGGLYLGESLGQIGIFAIFIGVVLFRPQGMFGAK 289
           ++GG ++G+VES  G YL +       + + + +++ +P G+FG K
Sbjct: 241 IVGGLVIGIVESFAGFYLPDGFKDTAPYIVVLLMLMIKPNGLFGEK 286