Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Dickeya dianthicola ME23

 Score =  135 bits (339), Expect = 1e-36
 Identities = 98/298 (32%), Positives = 154/298 (51%), Gaps = 23/298 (7%)

Query: 8   LPSVLNGLTTGAVYALIAVGLTLIYGVLHIINFAHGASLMLALYAVYFLKER---WGIDP 64
           L  + NG+T G+ YALIA+G T++YG++ +INFAHG   M+  Y  + +       GID 
Sbjct: 9   LQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDA 68

Query: 65  YM-----ALPIAIVGMFALGYALQRIVINRAGHGKDENILLATLGIAIVMENLALLLFKS 119
                  A   A+V   A G++++R+      + K    L++ +G++I ++N   L   S
Sbjct: 69  GWLLIGAAFIAAVVISSAYGWSIERVAYKPVRNSKRLIALISAIGMSIFLQNYVSLTQGS 128

Query: 120 DTRSIDTAY--------SLSTVAIGPAMIAVPKLVAFAGALVVSGVLFWIMGRTDLGRAI 171
              ++ +          S    A   +M     +V F   L ++  LF    R  +GRA 
Sbjct: 129 RDVALPSLIHGQWVLGESNGFAATLSSMQLTIWIVTFLAMLALT--LFIRYSR--MGRAC 184

Query: 172 RAVAKEKEGAKLMGIDVDHVYAMSFGIGLACLGAAACFLLPAYY--VNPQVGGGFVLVAF 229
           RA A++ + A L+GI  D V +++F IG A + A A  LL  +Y  +NP +G    + AF
Sbjct: 185 RACAEDLKMASLLGISTDRVISLTFVIG-AVMAAVAGVLLGQFYGVINPYIGFMAGMKAF 243

Query: 230 TIVVLGGMGSFVGALIGGFLVGVVESLGGLYLGESLGQIGIFAIFIGVVLFRPQGMFG 287
           T  VLGG+GS  GA+IGG ++G+ E+L   YL      +  FA+ I V+L  P G+ G
Sbjct: 244 TAAVLGGIGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSFALLIVVLLVMPTGILG 301