Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  120 bits (302), Expect = 4e-32
 Identities = 105/313 (33%), Positives = 157/313 (50%), Gaps = 36/313 (11%)

Query: 11  IALFAVLIGCVPFATSSGVVLNFVMMALYATLIAQAWNILGGFGGQFSFGHALFFGTGAY 70
           +A    L   +P AT +  +L F M AL       A N+L G+ G  SFG  +FFG GAY
Sbjct: 22  VASLVALPLLLPSATLATEILIFAMAAL-------ACNLLLGYTGLLSFGQGIFFGVGAY 74

Query: 71  IQAI--AQLQGGINAWLALPLAVAGASVVGLFVGALTFRYGLKGSYFALVTLAFAEVFRI 128
             A+    LQ G+ A L L  AV GA  + L VGAL  R    G YF ++TLAF+++   
Sbjct: 75  GAALLMIHLQWGMFAAL-LGAAVFGA-FLALLVGALAIR--RTGIYFVMLTLAFSQMAYF 130

Query: 129 VALSVD-FTGGGVGLMVPLRESVSNLQFTTRAGYLRVVLA---------MVVAALLVTWW 178
           +A ++  +TGG  GL+   R ++        AG++ V LA          V+  L+    
Sbjct: 131 LAYTLSGWTGGDNGLLDVPRPNIE------IAGHVLVDLADPRHFYVFVAVLFLLIFAAA 184

Query: 179 LR--NGRFGAYLQAVRDNEDAARAVGVNPFRIKLAAIGISAAFMGAAGAFYVQVFQYIDA 236
           LR     FG+ L A+R+NE  A A+G +    K+    +S A  G AGA Y  +  +   
Sbjct: 185 LRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPL 244

Query: 237 GIAYGSLTSVEALVAAIVGGMGTLWGPVLGAAVLHLLSDLTRNLFGELPGINMVIYGSVL 296
                 + S   L+  IVGG G+L+G +LGA  + LL D+   L+       +++ G +L
Sbjct: 245 S-NIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRW----LMLLGVIL 299

Query: 297 VLIVIFLPRGIAG 309
           +L+V+F+  G+ G
Sbjct: 300 ILVVVFMRGGLWG 312