Pairwise Alignments

Query, 1166 a.a., Two-component system sensor histidine kinase from Variovorax sp. SCN45

Subject, 1196 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  198 bits (503), Expect = 2e-54
 Identities = 165/546 (30%), Positives = 253/546 (46%), Gaps = 47/546 (8%)

Query: 436  AMLENQQAELEQTNSQLSERTEALDQRNTALRRVQRDLEDRADELQRASRYKSEFLANMS 495
            AML   + E++   + ++  T+      T  +  +  L +     + AS+ KS FLA MS
Sbjct: 490  AMLSAAEIEMDGEPAVIASSTDI-----TRHKEEEAALAEAKKVAEEASQAKSLFLATMS 544

Query: 496  HELRTPLNSALILAKLLGDNPQGNLSPEQVKFAESIYSSGNDLLVLINDILDISKVEAGK 555
            HE+RTP+N  L +A+LL D P   L  EQ + A  I  S   LL +INDILD SK+EA K
Sbjct: 545  HEIRTPMNGVLTMAQLLEDMP---LPAEQREMARVIRDSATSLLTIINDILDFSKIEADK 601

Query: 556  LEVVPEDVPLRRLAESLETTFRPLAMQKNLSFRLDIRPDAPGSLVTDSQRVEQILKNLLS 615
            L++   D+ L  + E +       A +K +S    + P     +V D  R+ QI+ NL  
Sbjct: 602  LQLELVDLSLSEVVEGVADLLTIRAQEKGISLITFVDPALTDMVVGDPIRLRQIITNLAG 661

Query: 616  NALKFTDRGEVALVVSGTADGGAA----FAVSDSGIGIDPQQHELIFEAFRQADGTTSRR 671
            NA+KFTD+G V + V             F+++D+GIG+D +Q   +FE F QAD T SRR
Sbjct: 662  NAIKFTDKGYVRIAVRALDPRERPLRLEFSITDTGIGLDSEQQARLFEPFMQADITISRR 721

Query: 672  YGGTGLGLSISRDLTQLLGGTLAVQSQPGQGSTFVLQLPAKAPQASGNASATQSPIYTPK 731
            YGGTGLGLSI R L  ++GG + V+S  GQGSTF  Q+P +  +         S I    
Sbjct: 722  YGGTGLGLSICRRLVAMMGGEIGVRSNVGQGSTFWFQVPLEPAEVEAEPPLDLSGIAVLV 781

Query: 732  PAHAPV---------GQAPAAPATPLAPQPPSPVPAPQFADDRSLPRDQVRRVLVIEDEP 782
             A  PV         G   A  A   + +    V A + A       D     + + D  
Sbjct: 782  LAEGPVAAECLRQYLGHLGAQVAVVASAE--GAVAAVRAAALAGWTYD-----VALLDGG 834

Query: 783  QFAHILYDLAHELGYRCLVAHGAADGFELATQFVPDAILLDMRLPDSTGLDVL--QRLKD 840
            Q   +   +A  L    + A G     ++A     DA         + GL  +  + ++ 
Sbjct: 835  QDFRLRLGVAGAL----MTAAGPDLELKVAMLVAQDAFAAVASEVKAAGLYAVLPKPIRR 890

Query: 841  SPHTRHIPIHVVSAADNAQGAALQMGAIGYALKPTTRDELMRVFARLEDKLTQKVKVVLL 900
                R++ + V  A   A+ A       G+  +P T +E     A           ++L+
Sbjct: 891  RQLWRNVAVAVGRATPEAEAADGTGAEEGW--RPPTMEEAAAAGA-----------LILV 937

Query: 901  VEDDDLQRESVMRLIEDDDIEIVAVGSGEEALELLRTRVFDCMITDLRLPDMQGSDLLKA 960
             ED+   +  +  L+E     I  VG+G EA E ++ R +  ++TD  +P+M G +L + 
Sbjct: 938  AEDNPTNKVVIRHLMERLGYAIEVVGNGTEAWERMQIRDYGLLLTDCHMPEMDGYELTQR 997

Query: 961  MAAEEI 966
            +   E+
Sbjct: 998  IREWEV 1003



 Score = 86.7 bits (213), Expect = 1e-20
 Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 3/123 (2%)

Query: 1041 GRTILLVDDDVRNIFALTSALEQRGAAVEIGRNGREALEKLDQVREIDLVLMDVMMPEMD 1100
            G  IL+ +D+  N   +   +E+ G A+E+  NG EA E++ Q+R+  L+L D  MPEMD
Sbjct: 932  GALILVAEDNPTNKVVIRHLMERLGYAIEVVGNGTEAWERM-QIRDYGLLLTDCHMPEMD 990

Query: 1101 GLEATRRMRA--DPRFEKMPVIAITAKAMKDDREQCLAAGANDYLAKPVDLERLFSLLRV 1158
            G E T+R+R         +P++A+TA A+     +CL +G N +LAKP+DL +L S +R 
Sbjct: 991  GYELTQRIREWEVETGHDLPIVALTADALAGTARRCLDSGMNAFLAKPIDLVQLDSTIRR 1050

Query: 1159 WMP 1161
             +P
Sbjct: 1051 LLP 1053



 Score = 36.2 bits (82), Expect = 2e-05
 Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 6/118 (5%)

Query: 775  VLVIEDEPQFAHILYDLAHELGYRCLVAHGAADGFELATQFVPDAILLDMRLPDSTGLDV 834
            +LV ED P    ++  L   LGY   V     + +E         +L D  +P+  G ++
Sbjct: 935  ILVAEDNPTNKVVIRHLMERLGYAIEVVGNGTEAWERMQIRDYGLLLTDCHMPEMDGYEL 994

Query: 835  LQRLKD-SPHTRH-IPIHVVSAADNAQGAA---LQMGAIGYALKPTTRDELMRVFARL 887
             QR+++    T H +PI V   AD   G A   L  G   +  KP    +L     RL
Sbjct: 995  TQRIREWEVETGHDLPI-VALTADALAGTARRCLDSGMNAFLAKPIDLVQLDSTIRRL 1051