Pairwise Alignments

Query, 388 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 410 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 98/374 (26%), Positives = 159/374 (42%), Gaps = 25/374 (6%)

Query: 29  VGMGFGRFAFTAVYPHMVAEGILSLRGGSYAASANYAGYLLGAVL--CVKARAGSAHRIC 86
           V +G  RFA+T + P ++     S     Y  +AN  GYL+GA++   +  R  +   + 
Sbjct: 25  VSIGLARFAYTPLIPTLIQAQWFSANDVVYLGAANLVGYLIGALIGRPIAQRTSNKTALR 84

Query: 87  LWSVIGTAACLMILAVLTQTWAIVAVRGLAGMFSSLSMVASSLWLLEH-----RGHHRGA 141
           +  V  T A       L+  W   A R L+G+     MV  +  +L H     RG   GA
Sbjct: 85  MMMVAVTLAFFACGFPLSVVW-FFAWRLLSGIAGGAIMVLVAATVLPHVPAARRGLASGA 143

Query: 142 PLLFAGVGVGIALSAEVLVLAAHAGMLSGGMWLTLGVITLAIGLLAAPGLVASGSQTLQA 201
             +F G+G+GIA S  ++    + G+     W  LG++ L   +L      A  + TL  
Sbjct: 144 --IFLGIGLGIAGSGTLVPPLLNLGLQQ--TWFGLGLLAL---VLTGASWFAWPTGTLHE 196

Query: 202 AGAAAASPSIQASVAARPLVAVYGLAGLGYIVTATYLPLLVKSALPHLDAAH----VWAV 257
           A AA    S         L A Y     G +    +L   V   L   D AH    +W +
Sbjct: 197 A-AAPTGTSAPTPSGVYLLFAQYAFMAAGLVPAMVFLVDYVARGLG--DGAHIGAMIWVM 253

Query: 258 FGLGAAPSCFFWHRVHGRIGTQAALQANLLIQAVGVALPVLSQSPAAYLSSALLVGGTFM 317
           +GLGA      +  +  ++G + +++  L++QA+ V L   + S  A    A+++G    
Sbjct: 254 YGLGAIVGPVTYGFLADKLGARLSIRVVLVVQAIAVGLLPFTGSFTALAVLAVVLGSFPP 313

Query: 318 GTVTIAMPAAQRAARASGKNLMA--TMTLVYGVGQIIGPVVADALHARSQSFSSSL-AVA 374
           G V +A+           +  +A    T+ +   Q +      AL   S    + L  +A
Sbjct: 314 GIVPLALARVHELLPNHHQQHVAWSRATVSFATFQALSGFAYSALFNSSGGQHALLFMIA 373

Query: 375 AGALVVAAAVALAL 388
           AGA+VVA A+ L +
Sbjct: 374 AGAIVVALALELGM 387