Pairwise Alignments

Query, 388 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 390 a.a., putative MFS superfamily transporter precursor from Pseudomonas putida KT2440

 Score =  127 bits (319), Expect = 5e-34
 Identities = 113/373 (30%), Positives = 170/373 (45%), Gaps = 18/373 (4%)

Query: 21  LEAALILAVGMGFGRFAFTAVYPHMVAEGILSLRGGSYAASANYAGYLLGAVLCVKARAG 80
           L +A+ L + MG GRFA T   P ++AEG   L      A+ANY GY +GAV  + AR+ 
Sbjct: 8   LASAVALMMAMGIGRFALTPQLPQLIAEGQFDLTVAGLVAAANYLGYFVGAVDAMFARSP 67

Query: 81  SAHRICLWSVIGTAACLMILA-VLTQTWAIVAVR---GLAGMFSSLSMVASSLWLLEHRG 136
              R  L   +     L + +      W  + +R   G+A  +  + + + S  +     
Sbjct: 68  GQVRRRLHGGLWLCVLLTLASWAANGFWGHLLLRFGTGVASAWVLVMITSLSQQVATAHN 127

Query: 137 HHRGAPLLFAGVGVGIALSAEVLVLAAHAGMLSGGMWLTLGVITLAIGLLAAPGLVASGS 196
             R   L+FAG G+GIA++  + ++A   G+ S  +WL   V  L + L   P L     
Sbjct: 128 RQRLGALVFAGPGLGIAVTGLLALVAHVLGLGSAALWLIYAVAALVMLLAVRPWL----P 183

Query: 197 QTLQAAGAAAASPSIQA---SVAARPLVAVYGLAGLGYIVTATYLPLLVKSALPHLDAAH 253
           + LQA  A   SP  Q    +V    L  VYGL G+GYI+ AT+L  +          A 
Sbjct: 184 RALQA--APTQSPVRQGPTRNVGTGRLGLVYGLYGMGYILPATFLSQMANQQFRGQWLAD 241

Query: 254 V-WAVFGLGAAPSCFFWH-RVHGRIGTQAALQANLLIQAVGVALPVLSQSPAAYLSSALL 311
           + W  FGL AA        R  GR  T   L A L +Q +GV   ++       L  A L
Sbjct: 242 LFWPAFGLAAALGVLLVSVRRDGR--TSTWLTATLWLQGLGVLACLMGGGIGLALGVA-L 298

Query: 312 VGGTFMGTVTIAMPAAQRAARASGKNLMATMTLVYGVGQIIGPVVADALHARSQSFSSSL 371
            GG F+  + + M  ++  A  + +     +T  + +GQ+ GP++A      S     +L
Sbjct: 299 CGGPFLACMQLVMQRSRELAPQATQRNAGLLTACFALGQLSGPLLAALSSHYSGGLQPAL 358

Query: 372 AVAAGALVVAAAV 384
            +AAG LVVA  +
Sbjct: 359 MLAAGGLVVAGGL 371



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 30/139 (21%)

Query: 88  WSVIGTAACLMILAVL------TQTW--AIVAVRGLAGM--------------------- 118
           W   G AA L +L V       T TW  A + ++GL  +                     
Sbjct: 244 WPAFGLAAALGVLLVSVRRDGRTSTWLTATLWLQGLGVLACLMGGGIGLALGVALCGGPF 303

Query: 119 FSSLSMVASSLWLLEHRGHHRGAPLLFAGVGVGIALSAEVLVLAAH-AGMLSGGMWLTLG 177
            + + +V      L  +   R A LL A   +G      +  L++H +G L   + L  G
Sbjct: 304 LACMQLVMQRSRELAPQATQRNAGLLTACFALGQLSGPLLAALSSHYSGGLQPALMLAAG 363

Query: 178 VITLAIGLLAAPGLVASGS 196
            + +A GL+  PG    GS
Sbjct: 364 GLVVAGGLVQLPGDAQQGS 382