Pairwise Alignments

Query, 838 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1423 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  137 bits (344), Expect = 6e-36
 Identities = 115/370 (31%), Positives = 182/370 (49%), Gaps = 30/370 (8%)

Query: 445  DAERRDQDKSRFLADAIHDLRQPLQVIGNALNPIGGAIRAGHTVNALNLAQMATRAAGNM 504
            DAE  +  KSRFLA A HDLRQPLQ +   L  +   + +G  V    L +        M
Sbjct: 825  DAELANNAKSRFLAAASHDLRQPLQSL-VLLQGLLAKVASGEKVE--RLVKRLDETISAM 881

Query: 505  RSQLAAILDLSRLESGFVKAELSDFDLVTLVRDTVEQTRAIAQESGTCVEFDPPLGKPVF 564
               L A+LD++++E+G +KAE+  F +  L+    E+    A+ +   +   P     + 
Sbjct: 882  SGMLNALLDINQIEAGTIKAEIVTFPINDLLDRMREELTYHARSAKLSLSVIP---CSLS 938

Query: 565  VRSDRHFLQRILLNLVSNGIKYRSADGGRRSHVRLLLTTHGQLTHLAIQDNGLGIPEEVL 624
            V SD   L+++L NL+SN +KY       R  V +    HG    + + D G+GIPE  L
Sbjct: 939  VESDPRLLEQMLRNLISNALKYTP-----RGRVLVGCRRHGPWLRIEVWDTGIGIPETEL 993

Query: 625  QSNVIFKPFFQLNNRHAEAEKGVGLGLSIVSALLDLLDNHQLSIQSEVGVGSTFTLEIPA 684
            ++  IF  + QL+N   E   G+GLGLSIV  L  LL+ H + ++S    GS F++++  
Sbjct: 994  RA--IFDEYHQLHNAARERNLGLGLGLSIVQRLGRLLE-HPVQVRSRPEHGSVFSIDVKL 1050

Query: 685  SVIAP------VFEAIPHDDFMAGGIEAARGKYVVLLEDDELVRQSLAAVFNAHGVLYEA 738
            +  AP      +   +P  D   G  +AA    V+++EDD  VR  L  +    G     
Sbjct: 1051 APPAPERRVPALPAPLPGKD--TGSRKAAA---VLVIEDDPDVRSLLELLLTTEGHAVTV 1105

Query: 739  WGSIEEMRQQLPFTERAPDVLLSDYRLPDGKTALDAIELMRSHWS-DVPTLILTGESLNS 797
                +     +      P+++L+DY LP+G T L+    +R+     +P +I+TG+    
Sbjct: 1106 APDGDTAVALVERNAIRPELILADYNLPNGMTGLETASRLRARLGRRIPVVIVTGD---- 1161

Query: 798  YALTSLRGIA 807
             + T+LR IA
Sbjct: 1162 ISTTTLRDIA 1171



 Score = 40.4 bits (93), Expect = 7e-07
 Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 5/110 (4%)

Query: 712  VVLLEDDELVRQSLAAVFNAHGVLYEAWGSIEEMRQQLPFTERAPDVLLSDYRLPDGKTA 771
            V +++DD+LVRQ + +V    G   E + S E   +   F    P  LL D  LP G   
Sbjct: 1221 VFIVDDDDLVRQGMRSVLEEDGRTVEDYDSCEAFIE--AFGTGRPGCLLVDAYLP-GMKG 1277

Query: 772  LDAIELMRSHWSDVPTLILTGESLNSYALTSLRGIAICY--KPVAPLDLL 819
            L+ ++ +++    +  +++TG S    A+ +++  A  +  KPV   DLL
Sbjct: 1278 LELLKHLQASSHGMAAIMITGNSDVRMAVEAMKAGAFDFIEKPVGRRDLL 1327