Pairwise Alignments

Query, 838 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 796 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  203 bits (516), Expect = 4e-56
 Identities = 195/678 (28%), Positives = 300/678 (44%), Gaps = 59/678 (8%)

Query: 60  LSLPDVTALPGSA-WKRRPWSSASYGFATAPHWFRSDP--FTASPDGSGTLLIEVGYPLL 116
           L++ DV+A   +  +K     + + G++ +  W + +        +   T L+E+ YP L
Sbjct: 44  LTIADVSAPSATPQFKPHDKDTLNAGYSRSVFWLKVNLHYLPTQAEAQRTWLLELAYPPL 103

Query: 117 DHLDLYVRVNAAASWTRWSLGDKQAFEQRPHDTPSFVVPVSVQPGDRVEILARVQTEGAM 176
           DHLDLY+  ++         GD   F  R     +++  V   PG+   +  R+Q+EG++
Sbjct: 104 DHLDLYLPDSSGTYRLAGRTGDALPFSAREIRQNNYLFKVDFAPGEAKTVYLRLQSEGSI 163

Query: 177 RFPLSVWQPRQFENAERRSLLVNGIYVGLMGGIFFYHLIIFLILRERIYLYYIGWILVTS 236
           + PL++W    +   +   L V G+  G++ G+  Y+L I+L +R+  YLYYI +I    
Sbjct: 164 QAPLTLWSSTAYLEQQPLRLYVLGLIYGVLLGMLVYNLFIYLSVRDTSYLYYIFYIASFG 223

Query: 237 GFILSYNGIAFQYLWPQATTWNDWCRIVFLFLATGLFTS-FTIQFVSNAATAPRRWHAAP 295
            + LS NG A +Y WP    W +     FL  +  LF S F   F+  A  +  RW    
Sbjct: 224 MYQLSVNGAAVEYFWPNNPWWAN-AATPFLIGSAALFGSLFARSFLHTAQHS--RW-INR 279

Query: 296 VLLAIALAVGASWL-----PFPQAVRVALLVQFVGTLVCFGLAIGPARAGHTYARVFLVT 350
           +LLA+    G   L      +  A+R+A  +  V T+  F  AI     G   AR F++ 
Sbjct: 280 LLLALVACGGVVMLLSLMTSYALALRLATGLALVFTVTIFVAAIKAWYCGQRVARYFIIA 339

Query: 351 FSGVLIGAALHTLDMLGVTAYFETSINFEVAPQVGSAFSVLLFSLALAHRLLEERRQRSI 410
           +S  L+G  ++TL +LG   Y         A Q+GSA  V L SLALA R+         
Sbjct: 340 WSAFLLGGVVNTLMVLG---YLPNVFLTMYASQIGSAIEVALLSLALADRI--------- 387

Query: 411 ATALAQTNATLADSMRVQQERSEFLLKIK-DRLRTDAERRDQDKSRFLADAIHDLRQPLQ 469
                       +SMR QQ +  F    K + L     R ++ K  FLA   H+LR P+ 
Sbjct: 388 ------------NSMREQQAQILFDASQKLEVLNQQLARSNRLKDEFLATLTHELRTPM- 434

Query: 470 VIGNALNPIGGAIRAGHTVNA-LNLAQMATRAAGNMRSQLA---AILDLSRLESGFVKAE 525
                 N + G++    TV    +LAQ    AAG+ R  +     IL L+ L++G + A+
Sbjct: 435 ------NGVIGSLELMQTVPLDADLAQYHQTAAGSARDMMRMVNGILTLTELQAGRLSAQ 488

Query: 526 LSDFDLVTLVRDTVEQTRAIAQESGTCVEFDPPLGKPVFVRSDRHFLQRILLNLVSNGIK 585
              F L   +    +Q  A AQ  G     D     P  V  D   L + L  L+ N  K
Sbjct: 489 PQVFSLRGTLDTLRQQFTANAQSKGLAFSIDVADELPDRVLGDADKLLQSLDCLLDNAFK 548

Query: 586 YRSADGGRRSHVRLLLTTHGQLTHLAIQDNGLGIPEEVLQSNVIFKPFFQLNNRHAEAEK 645
           +      R   V +  +  G      + D G+G     L    +++ FFQL+        
Sbjct: 549 FTHEGSVRLRVVGVPQSDGGLRLSFIVTDTGIGFA--FLDEATLYQRFFQLDGSTTREYG 606

Query: 646 GVGLGLSIVSALLDLLDNHQLSIQSEVGVGSTFTLEIPASVIAPVFEAIPHDDFMAGGIE 705
           G+G+GL+I   L++LL   +L+  SE   GS F LE+  S +A        D   A   +
Sbjct: 607 GLGIGLAICRQLIELLGG-RLTHHSEPRKGSRFQLELEVSPVA-------SDSKPAPDRQ 658

Query: 706 AARGKYVVLLEDDELVRQ 723
            A  +  VLL DD  V Q
Sbjct: 659 RAPQECSVLLVDDNSVGQ 676